RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 CHCHD3Q9NX63 227 aaKnown RBP8.79□□□□□ -1
CLCNKA-206ENST00000491433 LAMP5Q9UJQ1 280 aa8.79□□□□□ -1
CLCNKA-206ENST00000491433 MEX3AA1L020 520 aaKnown RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 SH2D7A6NKC9 451 aaPredicted RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 ZNF670-ZNF695F2Z2N8 137 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 IGLV1-47P01700 117 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 SNRNP70P08621 437 aaKnown RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 ERP29P30040 261 aaKnown RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 ATP6V1E1P36543 226 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 TMBIM6P55061 237 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 MRPL28Q13084 256 aaKnown RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 GRK1Q15835 563 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 HLA-DRB5Q30154 266 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 ZNF829Q3KNS6 432 aaPredicted RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 CCDC58Q4VC31 144 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 CXorf66Q5JRM2 361 aaPredicted RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 TPTE2P1Q5T6R2 138 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 FAM27D1Q5T7N8 215 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 CD200R1LQ6Q8B3 271 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 HEPN1Q6WQI6 88 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 TMPRSS11AQ6ZMR5 421 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 PLEKHG7Q6ZR37 379 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 SLC16A12Q6ZSM3 486 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 TCF23Q7RTU1 214 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 GPR141Q7Z602 305 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 SLC35E3Q7Z769 313 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 SBSPONQ8IVN8 264 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 Q8IYB0 196 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 DRAM1Q8N682 238 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 OR10H4Q8NGA5 316 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 HAVCR2Q8TDQ0 301 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 ASB17Q8WXJ9 295 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 ISOC1Q96CN7 298 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 DGCR14Q96DF8 476 aaKnown RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 PELI1Q96FA3 418 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 CEP19Q96LK0 163 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 MYCBPQ99417 103 aaPredicted RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 BCL7BQ9BQE9 202 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 PBOV1Q9GZY1 135 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 GPR84Q9NQS5 396 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 FAM206AQ9NX38 181 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 TAS2R3Q9NYW6 316 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 MRM2Q9UI43 246 aaKnown RBP8.78□□□□□ -1
CLCNKA-206ENST00000491433 SLC7A11Q9UPY5 501 aa8.78□□□□□ -1
CLCNKA-206ENST00000491433 TRGV10A0A0A0MS01 117 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 METTL15A6NJ78 407 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 DHRS7CA6NNS2 312 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 E9PI62 339 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 BUB1B-PAK6H3BSN5 160 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 CCRL2O00421 344 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 MGST3O14880 152 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 MYL12BO14950 172 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 ZNF254O75437 659 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 SC5DO75845 299 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 IGLV3-1P01715 115 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 IGHG2P01859 326 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 GALP22466 123 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 GABRR1P24046 479 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 CD34P28906 385 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 CDX1P47902 265 aaPredicted RBP8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 MED22Q15528 200 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 CTF1Q16619 201 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 PNLIPRP3Q17RR3 467 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 ZNF260Q3ZCT1 412 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 TMEM42Q69YG0 159 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 DMKNQ6E0U4 476 aaPredicted RBP8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 LCNL1Q6ZST4 164 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 ZNF679Q8IYX0 411 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 STPG2Q8N412 459 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 TRMT10AQ8TBZ6 339 aaKnown RBP8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 OR51E1Q8TCB6 317 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 NOL4LQ96MY1 436 aaPredicted RBP8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 DUX3Q96PT4 197 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 FUNDC2Q9BWH2 189 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 MOB1AQ9H8S9 216 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 NDUFB11Q9NX14 153 aa8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 NUFIP1Q9UHK0 495 aaKnown RBP8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 AMMECR1Q9Y4X0 333 aaPredicted RBP8.77□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A18PA6NE21 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A16PA6NEW6 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A20PA6NIJ5 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A9PA6NNJ1 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A12PA8MX19 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A5PA8MXJ8 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 AP4M1O00189 453 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 MAGEB4O15481 346 aaPredicted RBP8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 GABARAPO95166 117 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 HAND1O96004 215 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A15PP0C7V4 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A13PP0C7W8 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A14PP0C7W9 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 FAM90A24PP0C7X0 464 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 TMEM11P17152 192 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 CDK2P24941 298 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 P2RX3P56373 397 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 HES1Q14469 280 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 RPL22L1Q6P5R6 122 aaKnown RBP8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 C5orf56Q8N8D9 126 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 OR4D6Q8NGJ1 314 aa8.76□□□□□ -1.01
CLCNKA-206ENST00000491433 RPEQ96AT9 228 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms