RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 NUDT2P50583 147 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 KLF3P57682 345 aaPredicted RBP1.05□□□□□ -2.24
CPSF3-205ENST00000489629 SKP1P63208 163 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 BNIP2Q12982 314 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 ENDOGQ14249 297 aaKnown RBP1.05□□□□□ -2.24
CPSF3-205ENST00000489629 FLOT2Q14254 428 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 ZNHIT3Q15649 155 aaPredicted RBP1.05□□□□□ -2.24
CPSF3-205ENST00000489629 PDZD11Q5EBL8 140 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 UBE2NLQ5JXB2 153 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 RBM48Q5RL73 367 aaKnown RBP1.05□□□□□ -2.24
CPSF3-205ENST00000489629 NXNL2Q5VZ03 156 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 AMMECR1LQ6DCA0 310 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 CLEC6AQ6EIG7 209 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 FAM183BPQ6ZVS7 135 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 MRPL52Q86TS9 123 aaKnown RBP1.05□□□□□ -2.24
CPSF3-205ENST00000489629 C10orf107Q8IVU9 208 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 RIBC1Q8N443 379 aaPredicted RBP1.05□□□□□ -2.24
CPSF3-205ENST00000489629 C2orf15Q8WU43 125 aaKnown RBP1.05□□□□□ -2.24
CPSF3-205ENST00000489629 TWIST2Q8WVJ9 160 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 IFT81Q8WYA0 676 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 ZNF514Q96K75 400 aaPredicted RBP1.05□□□□□ -2.24
CPSF3-205ENST00000489629 YPEL4Q96NS1 127 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 ANAPC13Q9BS18 74 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 FAAP24Q9BTP7 215 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 NAGKQ9UJ70 344 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 OR51B4Q9Y5P0 310 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 ZNF780BQ9Y6R6 833 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 ATAD5Q96QE3 1844 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 KMT2EQ8IZD2 1858 aa1.05□□□□□ -2.24
CPSF3-205ENST00000489629 ZNF638Q14966 1978 aaKnown RBP1.05□□□□□ -2.24
CPSF3-205ENST00000489629 EIF4G1Q04637 1599 aaKnown RBP1.04□□□□□ -2.24
CPSF3-205ENST00000489629 ZNF407Q9C0G0 2248 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 IGHV2-26A0A0B4J1V2 119 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 A0A1B0GTI1 187 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 FAM183AA6NL82 134 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 ZNF729A6NN14 1252 aaPredicted RBP1.04□□□□□ -2.24
CPSF3-205ENST00000489629 C15orf65H3BRN8 121 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 GOLGA8RI6L899 631 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 GPR171O14626 319 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 TOR1AO14656 332 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 AQP9O43315 295 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 TCF21O43680 179 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 ENTPD6O75354 484 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 SNAP29O95721 258 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 SLC2A1P11166 492 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 PTHLHP12272 177 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 GTF2F2P13984 249 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 GABRA1P14867 456 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 ZNF3P17036 446 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 PRTN3P24158 256 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 CNTFRP26992 372 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 GRPRP30550 384 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 EVI2BP34910 448 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 FOXA1P55317 472 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 CLDN12P56749 244 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 SYCP1Q15431 976 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 SLC9A3R2Q15599 337 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 C4orf26Q17RF5 130 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 KRTAP25-1Q3LHN0 102 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 TMEM215Q68D42 235 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 LAMTOR1Q6IAA8 161 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 HCP5Q6MZN7 132 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 NIPAL1Q6NVV3 410 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 PAGE2Q7Z2X7 111 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 COMTD1Q86VU5 262 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 CD302Q8IX05 232 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 AMN1Q8IY45 258 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 SLC25A45Q8N413 288 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 OR7G1Q8NGA0 311 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 OR11L1Q8NGX0 322 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 ZNRF2Q8NHG8 242 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 DYNC2LI1Q8TCX1 351 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 DDIT4LQ96D03 193 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 REEP6Q96HR9 211 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 TRNT1Q96Q11 434 aaKnown RBP1.04□□□□□ -2.24
CPSF3-205ENST00000489629 HBEGFQ99075 208 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 PKMYT1Q99640 499 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 PITX2Q99697 317 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 TXNIPQ9H3M7 391 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 DUSP21Q9H596 190 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 ASCL3Q9NQ33 180 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 DIABLOQ9NR28 239 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 ASF1BQ9NVP2 202 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 U3KQK5 164 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 LRPPRCP42704 1394 aaKnown RBP1.04□□□□□ -2.24
CPSF3-205ENST00000489629 KIAA0232Q92628 1395 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 ATRNO75882 1429 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 SSH2Q76I76 1423 aa1.04□□□□□ -2.24
CPSF3-205ENST00000489629 SHANK3Q9BYB0 1731 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 MYO5BQ9ULV0 1848 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 DSCAML1Q8TD84 2053 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 ATG2BQ96BY7 2078 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 IGHV1-45A0A0A0MS14 117 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 IGHV3-21A0A0B4J1V1 117 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 TRAV8-2A0A0B4J237 113 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 A0A0B4J2C4 111 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 IGKV1-12A0A0C4DH73 117 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 A0A1W2PRG6 482 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 CD300LBA8K4G0 201 aa1.03□□□□□ -2.24
CPSF3-205ENST00000489629 D6RAR5 112 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms