RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 PXT1Q8NFP0 134 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 OR5D14Q8NGL3 314 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 RFESDQ8TAC1 157 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 LGALS12Q96DT0 336 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 WWC2-AS2Q96NR7 200 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 MCRIP2Q9BUT9 160 aaKnown RBP9.78□□□□□ -0.84
CPSF3-204ENST00000489403 ALG8Q9BVK2 526 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 BARHL1Q9BZE3 327 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 ISG20L2Q9H9L3 353 aaKnown RBP9.78□□□□□ -0.84
CPSF3-204ENST00000489403 ZFP57Q9NU63 452 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 AASSQ9UDR5 926 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 TMEM212A6NML5 194 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 H0YHG0 523 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 GABRPO00591 440 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 EI24O14681 340 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 ALPLP05186 524 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 SLC6A1P30531 599 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 SLC35B1P78383 322 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 PAX5Q02548 391 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 HNF4GQ14541 408 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 PIGYQ3MUY2 71 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 ZIK1Q3SY52 487 aaPredicted RBP9.77□□□□□ -0.85
CPSF3-204ENST00000489403 SYS1Q8N2H4 156 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 STPG2Q8N412 459 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 OR10A7Q8NGE5 316 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 OR51A2Q8NGJ7 313 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 OR10K1Q8NGX5 313 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 HAVCR2Q8TDQ0 301 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 DUX3Q96PT4 197 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 PDCD1LG2Q9BQ51 273 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 ZNF581Q9P0T4 197 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 DHDHQ9UQ10 334 aa9.77□□□□□ -0.85
CPSF3-204ENST00000489403 TRAV39A0A0B4J263 110 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 A0A1W2PPE3 182 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 LINC01548A6NM66 108 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 E9PI62 339 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 HSD17B6O14756 317 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 GABRB1P18505 474 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 RASSF2P50749 326 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 ZNF816Q0VGE8 651 aaPredicted RBP9.76□□□□□ -0.85
CPSF3-204ENST00000489403 ZNF529Q6P280 563 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 SLC16A12Q6ZSM3 486 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 FOXRED2Q8IWF2 684 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 COMMD1Q8N668 190 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 Q8NFD4 153 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 OR10X1Q8NGY0 326 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 OR5AK2Q8NH90 309 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 TNFAIP8L1Q8WVP5 186 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 TSEN15Q8WW01 171 aaKnown RBP9.76□□□□□ -0.85
CPSF3-204ENST00000489403 MRPL48Q96GC5 212 aaKnown RBP9.76□□□□□ -0.85
CPSF3-204ENST00000489403 RAX2Q96IS3 184 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 FAM192AQ9GZU8 254 aa9.76□□□□□ -0.85
CPSF3-204ENST00000489403 IGHV3-72A0A0B4J1Y9 119 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 IGHV1-3A0A0C4DH29 117 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 SNTNA6NMZ2 147 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 RAB3AP20336 220 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 REG1BP48304 166 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 KCNJ3P48549 501 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 DGCR2P98153 550 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 DCTN2Q13561 401 aaKnown RBP9.75□□□□□ -0.85
CPSF3-204ENST00000489403 EBI3Q14213 229 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 UNQ9370/PRO34162Q6UXP9 181 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 SATL1Q86VE3 508 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 ZNF695Q8IW36 515 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 IZUMO1Q8IYV9 350 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 Q8N9W7 124 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 SUMF2Q8NBJ7 301 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 PYDC1Q8WXC3 89 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 TFAP2CQ92754 450 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 CPNE2Q96FN4 548 aaPredicted RBP9.75□□□□□ -0.85
CPSF3-204ENST00000489403 EAF1Q96JC9 268 aaPredicted RBP9.75□□□□□ -0.85
CPSF3-204ENST00000489403 GPER1Q99527 375 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 DPCDQ9BVM2 203 aaPredicted RBP9.75□□□□□ -0.85
CPSF3-204ENST00000489403 ERVK13-1Q9NX77 482 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 TAS2R4Q9NYW5 299 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 ORC6Q9Y5N6 252 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 NBEAL2Q6ZNJ1 2754 aa9.75□□□□□ -0.85
CPSF3-204ENST00000489403 CCL24O00175 119 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 AP4M1O00189 453 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 CCRL2O00421 344 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 MAGEB3O15480 346 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 HTR3BO95264 441 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 RPLP1P05386 114 aaKnown RBP9.74□□□□□ -0.85
CPSF3-204ENST00000489403 RPSAP08865 295 aaKnown RBP9.74□□□□□ -0.85
CPSF3-204ENST00000489403 GPR12P47775 334 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 SOX2P48431 317 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 ALDH3A2P51648 485 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 RAB25P57735 213 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 MRPL28Q13084 256 aaKnown RBP9.74□□□□□ -0.85
CPSF3-204ENST00000489403 RSU1Q15404 277 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 FAM53AQ6NSI3 398 aaPredicted RBP9.74□□□□□ -0.85
CPSF3-204ENST00000489403 TEX38Q6PEX7 206 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 ASCL4Q6XD76 172 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 MOB3BQ86TA1 216 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 TGIF2LXQ8IUE1 241 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 Q8N6K4 173 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 RGP1Q92546 391 aaPredicted RBP9.74□□□□□ -0.85
CPSF3-204ENST00000489403 MYCBPQ99417 103 aaPredicted RBP9.74□□□□□ -0.85
CPSF3-204ENST00000489403 JAM3Q9BX67 310 aa9.74□□□□□ -0.85
CPSF3-204ENST00000489403 ABCG5Q9H222 651 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms