RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 MOB1BQ7L9L4 216 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 GVQW1Q8N7I0 195 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 Q9N2K0 584 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 TAS2R8Q9NYW2 309 aa13.29□□□□□ -0.28
CLDN11-208ENST00000488989 YLPM1P49750 1951 aaKnown RBP13.29□□□□□ -0.28
CLDN11-208ENST00000488989 A0A1W2PQ09 198 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 ANKRD20A5PA0PJZ0 165 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 MEIS3P1A6NDR6 274 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 GLIPR1P48060 266 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 NPY4RP50391 375 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 DCTN2Q13561 401 aaKnown RBP13.28□□□□□ -0.28
CLDN11-208ENST00000488989 KLF9Q13886 244 aaPredicted RBP13.28□□□□□ -0.28
CLDN11-208ENST00000488989 C11orf91Q3C1V1 193 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 PRSS57Q6UWY2 283 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 GDPD3Q7L5L3 318 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 NLRC3Q7RTR2 1065 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 FGFRL1Q8N441 504 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 TMEM229BQ8NBD8 167 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 OR8B3Q8NGG8 313 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 ZFAND2BQ8WV99 257 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 DEDD2Q8WXF8 326 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 SNAPC3Q92966 411 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 OR8B2Q96RD0 313 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 CHMP1AQ9HD42 196 aaPredicted RBP13.28□□□□□ -0.28
CLDN11-208ENST00000488989 IFT46Q9NQC8 304 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 KIF25Q9UIL4 384 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 MGAT4AQ9UM21 535 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 HECTD1Q9ULT8 2610 aa13.28□□□□□ -0.28
CLDN11-208ENST00000488989 PRRC2AP48634 2157 aaKnown RBP13.27□□□□□ -0.28
CLDN11-208ENST00000488989 IGHV4-30-2A0A087WSY4 118 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 ODAMA1E959 279 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 ECDO95905 644 aaPredicted RBP13.27□□□□□ -0.29
CLDN11-208ENST00000488989 IGHV2-5P01817 119 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 CSF1P09603 554 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 GSTT2BP0CG30 244 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 LMO4P61968 165 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 CLEC12BQ2HXU8 276 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 WDR25Q64LD2 544 aaPredicted RBP13.27□□□□□ -0.29
CLDN11-208ENST00000488989 STEAP3Q658P3 488 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 ZNF554Q86TJ5 538 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 LYSMD2Q8IV50 215 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 BEST4Q8NFU0 473 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 OR4K15Q8NH41 348 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 CLDND2Q8NHS1 167 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 CORO2AQ92828 525 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 ZNF286AQ9HBT8 521 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 ABCB10Q9NRK6 738 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 ZNF230Q9UIE0 474 aaPredicted RBP13.27□□□□□ -0.29
CLDN11-208ENST00000488989 PCDHB10Q9UN67 800 aa13.27□□□□□ -0.29
CLDN11-208ENST00000488989 IGKV1D-8A0A087WSZ0 117 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 MEIKINA0A087WXM9 373 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 CD74P04233 296 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 CGB3P0DN86 165 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 CGB7P0DN87 165 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 SLC25A16P16260 332 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 NDUFB7P17568 137 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 TAS2R19P59542 299 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 AP3S2P59780 193 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 MEF2CQ06413 473 aaPredicted RBP13.26□□□□□ -0.29
CLDN11-208ENST00000488989 DYRK1AQ13627 763 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 EDDM3AQ14507 147 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 ITPR2Q14571 2701 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 HMGN3Q15651 99 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 C16orf87Q6PH81 154 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 TRAT1Q6PIZ9 186 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 TOMM5Q8N4H5 51 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 TPRX1Q8N7U7 411 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 ST6GALNAC5Q9BVH7 336 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 OR6C3Q9NZP0 311 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 LPAR3Q9UBY5 353 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 TRAPPC2LQ9UL33 140 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 PDZD2O15018 2839 aa13.26□□□□□ -0.29
CLDN11-208ENST00000488989 ARHGAP32A7KAX9 2087 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 TRBV23-1A0A0A0MS06 115 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 KIR2DS1A0A191URI9 304 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 A8MXK9 166 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 TRDCB7Z8K6 153 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 PLA2G10O15496 165 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 RCC1P18754 421 aaPredicted RBP13.25□□□□□ -0.29
CLDN11-208ENST00000488989 TBPP20226 339 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 KIR2DS4P43632 304 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 EDDM3BP56851 147 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 HLA-DRB3P79483 266 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 KIR2DS1Q14954 304 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 C6orf183Q5T699 404 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 OR52W1Q6IF63 320 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 TCF23Q7RTU1 214 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 KRTAP1-3Q8IUG1 177 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 OR13A1Q8NGR1 328 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 C8orf46Q8TAG6 207 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 MAFIPQ8WZ33 124 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 C7orf50Q9BRJ6 194 aaKnown RBP13.25□□□□□ -0.29
CLDN11-208ENST00000488989 DCTN5Q9BTE1 182 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 ING3Q9NXR8 418 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 CLN8Q9UBY8 286 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 OPN4Q9UHM6 478 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 ANXA10Q9UJ72 324 aa13.25□□□□□ -0.29
CLDN11-208ENST00000488989 MED13LQ71F56 2210 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 A0A096LNT2 108 aa13.24□□□□□ -0.29
CLDN11-208ENST00000488989 IGHV4-61A0A0C4DH41 118 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms