RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 CCDC159P0C7I6 412 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 GZMHP20718 246 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 KCNJ3P48549 501 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 MADCAM1Q13477 382 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 HES1Q14469 280 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 VAX1Q5SQQ9 334 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 ZNF529Q6P280 563 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 ASCL4Q6XD76 172 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 CBR4Q8N4T8 237 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 LINC00482Q8N8I6 264 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 OR10A7Q8NGE5 316 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 OR56B4Q8NH76 319 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 LEAP2Q969E1 77 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 CPNE2Q96FN4 548 aaPredicted RBP12.14□□□□□ -0.47
TRIM50-203ENST00000488217 GPER1Q99527 375 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 ZFP57Q9NU63 452 aa12.14□□□□□ -0.47
TRIM50-203ENST00000488217 WI2-2373I1.2A0A1W2PRP0 233 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 IL1AP01583 271 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 GLP1RP43220 463 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 RAB7AP51149 207 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 PAX5Q02548 391 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 EGFEM1PQ0D2K5 195 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 RAB40BQ12829 278 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 DIAPH2-AS1Q14236 149 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 IL13RA2Q14627 380 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 RSU1Q15404 277 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 LTC4SQ16873 150 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 RSBN1Q5VWQ0 802 aaPredicted RBP12.13□□□□□ -0.47
TRIM50-203ENST00000488217 MRPL41Q8IXM3 137 aaKnown RBP12.13□□□□□ -0.47
TRIM50-203ENST00000488217 MRGPRDQ8TDS7 321 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 CHPT1Q8WUD6 406 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 TNFAIP8L1Q8WVP5 186 aa12.13□□□□□ -0.47
TRIM50-203ENST00000488217 TSEN15Q8WW01 171 aaKnown RBP12.13□□□□□ -0.47
TRIM50-203ENST00000488217 MRPS18AQ9NVS2 196 aaKnown RBP12.13□□□□□ -0.47
TRIM50-203ENST00000488217 NKX1-2Q9UD57 310 aaPredicted RBP12.13□□□□□ -0.47
TRIM50-203ENST00000488217 SERPINE3A8MV23 424 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 GABRPO00591 440 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 HTR3BO95264 441 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 TMEM11P17152 192 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 GTF2A1P52655 376 aaPredicted RBP12.12□□□□□ -0.47
TRIM50-203ENST00000488217 KLHL22Q53GT1 634 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 OR8H3Q8N146 312 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 C5orf56Q8N8D9 126 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 OR51D1Q8NGF3 324 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 OR52I1Q8NGK6 324 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 OR10K1Q8NGX5 313 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 OR10X1Q8NGY0 326 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
TRIM50-203ENST00000488217 C9orf16Q9BUW7 83 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 DPCDQ9BVM2 203 aaPredicted RBP12.12□□□□□ -0.47
TRIM50-203ENST00000488217 GPR61Q9BZJ8 451 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 ING4Q9UNL4 249 aa12.12□□□□□ -0.47
TRIM50-203ENST00000488217 RPL36Q9Y3U8 105 aaKnown RBP12.12□□□□□ -0.47
TRIM50-203ENST00000488217 TRAV39A0A0B4J263 110 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 LOC100130705A0A1B0GUX0 176 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 A0A1W2PPI3 338 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 FGF16O43320 207 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 GAPDHP04406 335 aaKnown RBP12.11□□□□□ -0.47
TRIM50-203ENST00000488217 HOXD3P31249 432 aaPredicted RBP12.11□□□□□ -0.47
TRIM50-203ENST00000488217 MYCNOSP40205 109 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 SOX2P48431 317 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 THBS3P49746 956 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
TRIM50-203ENST00000488217 RIPK1Q13546 671 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 PIGYQ3MUY2 71 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 LPCAT4Q643R3 524 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 SUMF2Q8NBJ7 301 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 OR51A2Q8NGJ7 313 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 PLPPR1Q8TBJ4 325 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 SLC29A1Q99808 456 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 MCRIP2Q9BUT9 160 aaKnown RBP12.11□□□□□ -0.47
TRIM50-203ENST00000488217 JAM3Q9BX67 310 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 FAM118AQ9NWS6 357 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 ST3GAL6Q9Y274 331 aa12.11□□□□□ -0.47
TRIM50-203ENST00000488217 KMT2CQ8NEZ4 4911 aaKnown RBP12.11□□□□□ -0.47
TRIM50-203ENST00000488217 A0A1W2PPE3 182 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 CDRT1O95170 752 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 IGKV1D-33P01593 117 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 IGKV1-33P01594 117 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 IGHG2P01859 326 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 SLC6A1P30531 599 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 GNG10P50151 68 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 SLC35B1P78383 322 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 EBI3Q14213 229 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 CCDC58Q4VC31 144 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 RPL22L1Q6P5R6 122 aaKnown RBP12.1□□□□□ -0.47
TRIM50-203ENST00000488217 OR2W3Q7Z3T1 314 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 MOB3BQ86TA1 216 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 COMMD1Q8N668 190 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 GPR148Q8TDV2 347 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 DPF1Q92782 380 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 FAM192AQ9GZU8 254 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 METTL9Q9H1A3 318 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 IFT22Q9H7X7 185 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 TAS2R4Q9NYW5 299 aa12.1□□□□□ -0.47
TRIM50-203ENST00000488217 LINC01548A6NM66 108 aa12.09□□□□□ -0.47
TRIM50-203ENST00000488217 NCBP2LA6PVI3 153 aaKnown RBP12.09□□□□□ -0.47
TRIM50-203ENST00000488217 CASQ2O14958 399 aaPredicted RBP12.09□□□□□ -0.47
TRIM50-203ENST00000488217 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms