RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 EHFQ9NZC4 300 aa4.09□□□□□ -1.75
CDC42BPA-213ENST00000488131 PAM16Q9Y3D7 125 aa4.09□□□□□ -1.75
CDC42BPA-213ENST00000488131 LRP12Q9Y561 859 aa4.09□□□□□ -1.75
CDC42BPA-213ENST00000488131 PXMP4Q9Y6I8 212 aa4.09□□□□□ -1.75
CDC42BPA-213ENST00000488131 DOCK3Q8IZD9 2030 aa4.09□□□□□ -1.75
CDC42BPA-213ENST00000488131 KIF26BQ2KJY2 2108 aa4.09□□□□□ -1.75
CDC42BPA-213ENST00000488131 LRRK1Q38SD2 2015 aa4.09□□□□□ -1.75
CDC42BPA-213ENST00000488131 CPAMD8Q8IZJ3 1885 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 IGSF23A1L1A6 192 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 FAM166BA8MTA8 275 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 AHRRA9YTQ3 701 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM250H0YL14 139 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 K7EQS6 105 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 K7ERU9 68 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 M0QZ24 198 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 FOXS1O43638 330 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 VENTXO95231 258 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 CNOT4O95628 575 aaKnown RBP4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 CDS2O95674 445 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 DDAH2O95865 285 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 BGLAPP02818 100 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 CPMP14384 443 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 FOSL2P15408 326 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 AADACP22760 399 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TNFSF4P23510 183 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 CD52P31358 61 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 CAPZBP47756 277 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 SNU13P55769 128 aaKnown RBP4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 UCP3P55916 312 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM50BP56557 158 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TAS2R30P59541 319 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 ERVS71-1P61550 626 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 RPL23P62829 140 aaKnown RBP4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TCTN1Q2MV58 587 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 MPV17LQ2QL34 196 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 BSXQ3C1V8 233 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TDRG1Q3Y452 100 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 CLLU1OSQ5K130 101 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 MRGPRGQ86SM5 289 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 PLXDC1Q8IUK5 500 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM256Q8N2U0 113 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 PNKDQ8N490 385 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 C2orf73Q8N5S3 287 aaPredicted RBP4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 Q8N976 141 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 VN1R2Q8NFZ6 395 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR2A1Q8NGT9 310 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR5B3Q8NH48 314 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR52N5Q8NH56 324 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 KCNG3Q8TAE7 436 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM37Q8WXS4 190 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TOMM40LQ969M1 308 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 WDYHV1Q96HA8 205 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 SGCZQ96LD1 299 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 NICN1Q9BSH3 213 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 LMF2Q9BU23 707 aaKnown RBP4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR51I2Q9H344 312 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF703Q9H7S9 590 aaPredicted RBP4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 NAA60Q9H7X0 242 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 PLEKHF2Q9H8W4 249 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 MMP25Q9NPA2 562 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TMEM140Q9NV12 185 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 RNF181Q9P0P0 153 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 LRIT1Q9P2V4 623 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TBX21Q9UL17 535 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 CLEC4EQ9ULY5 219 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 B9D1Q9UPM9 204 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 Q9Y3F1 56 aa4.09□□□□□ -1.76
CDC42BPA-213ENST00000488131 TRPM6Q9BX84 2022 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 CHD3Q12873 2000 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 IGLV1-36A0A0B4J1U3 117 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 IGHV2-26A0A0B4J1V2 119 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 DUXBA0A1W2PPF3 345 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 ANKUB1A6NFN9 424 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR5B21A6NL26 309 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 SERPINE3A8MV23 424 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 OVOL3O00110 214 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 HS3ST1O14792 307 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 NUPR1O60356 82 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 HYPMO75409 117 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 OR6A2O95222 327 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 IFNA1P01562 189 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 HPNP05981 417 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 PNMTP11086 282 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 IL3RAP26951 378 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 RPS27P42677 84 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 GRK6P43250 576 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 HNRNPA3P51991 378 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 YPEL3P61236 119 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 CSNK2A1P68400 391 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 DPTQ07507 201 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 MRPL49Q13405 166 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 GNMTQ14749 295 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 SHBQ15464 509 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 CD226Q15762 336 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 ADIRFQ15847 76 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 LDLRAD2Q5SZI1 272 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 PSRC1Q6PGN9 363 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 KCNIP4Q6PIL6 250 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 SLC24A5Q71RS6 500 aa4.08□□□□□ -1.76
CDC42BPA-213ENST00000488131 ZNF440Q8IYI8 595 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms