RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 SH3BGRL2Q9UJC5 107 aa11.81□□□□□ -0.52
COPS7B-221ENST00000488111 ATRXP46100 2492 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 PPP1R2P9O14990 202 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF133P52736 654 aaPredicted RBP11.8□□□□□ -0.52
COPS7B-221ENST00000488111 ELOBQ15370 118 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 IAH1Q2TAA2 248 aaPredicted RBP11.8□□□□□ -0.52
COPS7B-221ENST00000488111 PCSK4Q6UW60 755 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF101Q8IZC7 436 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 LFNGQ8NES3 379 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 FAM57AQ8TBR7 257 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 NICN1Q9BSH3 213 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 GPR61Q9BZJ8 451 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 LPAR5Q9H1C0 372 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 SLC5A6Q9Y289 635 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 FAM215AQ9Y5M1 114 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 PUS1Q9Y606 427 aaKnown RBP eCLIP11.8□□□□□ -0.52
COPS7B-221ENST00000488111 GTF3C1Q12789 2109 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 ACACBO00763 2458 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 ITPR1Q14643 2758 aa11.8□□□□□ -0.52
COPS7B-221ENST00000488111 OR5H1A6NKK0 313 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 SYT7O43581 403 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 SS18L1O75177 396 aaPredicted RBP11.79□□□□□ -0.52
COPS7B-221ENST00000488111 CXCL1P09341 107 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 B4GALT1P15291 398 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 GLRA1P23415 457 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 FHITP49789 147 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 PLAC9Q5JTB6 97 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 SOHLH1Q5JUK2 328 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 SUMF2Q8NBJ7 301 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 OR13D1Q8NGV5 346 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 OR5H2Q8NGV7 314 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 Q8WTZ3 238 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 NABP1Q96AH0 204 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 LHFPL6Q9Y693 200 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 P2RY10O00398 339 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 PTBP3O95758 552 aaKnown RBP11.79□□□□□ -0.52
COPS7B-221ENST00000488111 HIST1H1DP16402 221 aaKnown RBP11.79□□□□□ -0.52
COPS7B-221ENST00000488111 HIKESHIQ53FT3 197 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 HIST2H3PS2Q5TEC6 136 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 GFI1BQ5VTD9 330 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 VWA1Q6PCB0 445 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 FAM214BQ7L5A3 538 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 OR5R1Q8NH85 324 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 CPT1CQ8TCG5 803 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 FGGYQ96C11 551 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 MISP3Q96FF7 219 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 PRO1933Q9H354 126 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 NELFAQ9H3P2 528 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 CENPMQ9NSP4 180 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 C1orf123Q9NWV4 160 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 PPP1R14DQ9NXH3 145 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 PKD1L2Q7Z442 2459 aa11.79□□□□□ -0.52
COPS7B-221ENST00000488111 RER1O15258 196 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 WDR1O75083 606 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 PATE4P0C8F1 98 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 MSR1P21757 451 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 PTGER4P35408 488 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 KIR2DL2P43627 348 aaPredicted RBP11.78□□□□□ -0.52
COPS7B-221ENST00000488111 P2RY1P47900 373 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 RELQ04864 619 aaPredicted RBP11.78□□□□□ -0.52
COPS7B-221ENST00000488111 UBE2V2Q15819 145 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 RIPPLY2Q5TAB7 128 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 DOLPP1Q86YN1 238 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 TMEM104Q8NE00 496 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 HPSE2Q8WWQ2 592 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 EMG1Q92979 244 aaKnown RBP11.78□□□□□ -0.52
COPS7B-221ENST00000488111 BSCL2Q96G97 398 aaPredicted RBP11.78□□□□□ -0.52
COPS7B-221ENST00000488111 FOXB1Q99853 325 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 WFDC1Q9HC57 220 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 TMEM38BQ9NVV0 291 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 FREM1Q5H8C1 2179 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 CACNA1CQ13936 2221 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 MED12LQ86YW9 2145 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 A0A096LPE4 126 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 A0A1W2PPZ6 126 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 RAD51DO75771 328 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 ENDOGQ14249 297 aaKnown RBP11.78□□□□□ -0.52
COPS7B-221ENST00000488111 C1orf185Q5T7R7 199 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 ALKBH2Q6NS38 261 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 OR10AD1Q8NGE0 317 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 OR2AJ1Q8NGZ0 328 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 LINC00470Q9BZP3 86 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 GP6Q9HCN6 339 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 GLRX2Q9NS18 164 aa11.78□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF727A8MUV8 499 aa11.77□□□□□ -0.52
COPS7B-221ENST00000488111 PRRG2O14669 202 aa11.77□□□□□ -0.52
COPS7B-221ENST00000488111 TCAPO15273 167 aa11.77□□□□□ -0.52
COPS7B-221ENST00000488111 PPP1CCP36873 323 aaKnown RBP11.77□□□□□ -0.52
COPS7B-221ENST00000488111 NKX6-1P78426 367 aaPredicted RBP11.77□□□□□ -0.52
COPS7B-221ENST00000488111 MRPS34P82930 218 aaKnown RBP11.77□□□□□ -0.52
COPS7B-221ENST00000488111 ARF1P84077 181 aaKnown RBP11.77□□□□□ -0.52
COPS7B-221ENST00000488111 KCNMB1Q16558 191 aa11.77□□□□□ -0.52
COPS7B-221ENST00000488111 ZNF343Q6P1L6 599 aa11.77□□□□□ -0.52
COPS7B-221ENST00000488111 KLHL24Q6TFL4 600 aa11.77□□□□□ -0.52
COPS7B-221ENST00000488111 FOXL2NBQ6ZUU3 175 aa11.77□□□□□ -0.52
COPS7B-221ENST00000488111 NAXEQ8NCW5 288 aa11.77□□□□□ -0.52
COPS7B-221ENST00000488111 RAB39BQ96DA2 213 aa11.77□□□□□ -0.52
COPS7B-221ENST00000488111 TMEM269A0A1B0GVZ9 245 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms