RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RBM39Q14498 530 aaKnown RBP10.56□□□□□ -0.72
HDAC6-229ENST00000486665 KRBOX4Q5JUW0 171 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 SLC35E4Q6ICL7 350 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 ZNF497Q6ZNH5 498 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 Q6ZPA2 131 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 BTN2A1Q7KYR7 527 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 GDPD3Q7L5L3 318 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 OR4M2Q8NGB6 313 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 GCDHQ92947 438 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-229ENST00000486665 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 ABHD1Q96SE0 405 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 SSBP3Q9BWW4 388 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-229ENST00000486665 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.56□□□□□ -0.72
HDAC6-229ENST00000486665 C19orf12Q9NSK7 152 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 NBEAL1Q6ZS30 2694 aa10.56□□□□□ -0.72
HDAC6-229ENST00000486665 YLPM1P49750 1951 aaKnown RBP10.56□□□□□ -0.72
HDAC6-229ENST00000486665 FABP12A6NFH5 140 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 C22orf46C9J442 243 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 SSX5O60225 188 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 ERP29P30040 261 aaKnown RBP10.55□□□□□ -0.72
HDAC6-229ENST00000486665 TALDO1P37837 337 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 MNDAP41218 407 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 KCNJ3P48549 501 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 NPY4RP50391 375 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 P2RX3P56373 397 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 EDDM3BP56851 147 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 LCN2P80188 198 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 GUCA2AQ02747 115 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 ESCO2Q56NI9 601 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 HACD4Q5VWC8 232 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 C5orf24Q7Z6I8 188 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 SNX29P2Q8IUI4 249 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 GAPTQ8N292 157 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 MRPL30Q8TCC3 161 aaKnown RBP10.55□□□□□ -0.72
HDAC6-229ENST00000486665 CCDC107Q8WV48 283 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 NUDCD2Q8WVJ2 157 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 H1FXQ92522 213 aaKnown RBP10.55□□□□□ -0.72
HDAC6-229ENST00000486665 C1orf159Q96HA4 380 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 KIF25Q9UIL4 384 aa10.55□□□□□ -0.72
HDAC6-229ENST00000486665 LOC105371242A0A075B767 164 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 MEIKINA0A087WXM9 373 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 TMEM30CPA0ZSE6 113 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 ODAMA1E959 279 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 MEIOCA2RUB1 952 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 RNF212BA8MTL3 300 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 SERPINE3A8MV23 424 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 NAPSAO96009 420 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 CD3GP09693 182 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 PAX5Q02548 391 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 ARFRP1Q13795 201 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 PNLIPRP3Q17RR3 467 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 TMEM200BQ69YZ2 307 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 TCF23Q7RTU1 214 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 LY6G5BQ8NDX9 201 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 OR4K15Q8NH41 348 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 CMSS1Q9BQ75 279 aaKnown RBP10.54□□□□□ -0.72
HDAC6-229ENST00000486665 LPAR2Q9HBW0 351 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 MMP26Q9NRE1 261 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 V9GYH0 126 aa10.54□□□□□ -0.72
HDAC6-229ENST00000486665 A8MXK9 166 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 GPR37O15354 613 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 CD5LO43866 347 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 CA11O75493 328 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 FOXH1O75593 365 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 TPPPO94811 219 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 ECDO95905 644 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-229ENST00000486665 PRSS3P35030 304 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 ETV6P41212 452 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 GNG2P59768 71 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 RPL31P62899 125 aaKnown RBP10.53□□□□□ -0.72
HDAC6-229ENST00000486665 PAX2Q02962 417 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 IL18Q14116 193 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 ZNF273Q14593 569 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 ARL6IP1Q15041 203 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 PYHIN1Q6K0P9 492 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 ZNF880Q6PDB4 577 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 FAM131AQ6UXB0 335 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 FAM185AQ8N0U4 392 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 MFSD4AQ8N468 514 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 OR13A1Q8NGR1 328 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 MAFIPQ8WZ33 124 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 NCOR1P1Q9H4R4 102 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 CHMP1AQ9HD42 196 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-229ENST00000486665 AKIP1Q9NQ31 210 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 YAE1D1Q9NRH1 226 aa10.53□□□□□ -0.72
HDAC6-229ENST00000486665 ZNF230Q9UIE0 474 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-229ENST00000486665 RPUSD1Q9UJJ7 312 aaKnown RBP10.53□□□□□ -0.72
HDAC6-229ENST00000486665 MALRD1Q5VYJ5 2156 aa10.52□□□□□ -0.72
HDAC6-229ENST00000486665 TRBV23-1A0A0A0MS06 115 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 TRBV6-6A0A0A6YYG2 114 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 FUOMA2VDF0 154 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 MEIS3P1A6NDR6 274 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 CGB3P0DN86 165 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 CGB7P0DN87 165 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 IGHV4-31P0DP07 118 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 RCC1P18754 421 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-229ENST00000486665 ERVFRD-1P60508 538 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 MEF2CQ06413 473 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-229ENST00000486665 ZNF79Q15937 498 aa10.52□□□□□ -0.73
HDAC6-229ENST00000486665 CR1LQ2VPA4 569 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms