RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 NDUFA7O95182 113 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 CNIH1O95406 144 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 IFNW1P05000 195 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 CSN3P07498 182 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 OR10J4P0C629 311 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 SPI1P17947 270 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 EPHA2P29317 976 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 SERPINB10P48595 397 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 SELENOPP49908 381 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 DAP3P51398 398 aaKnown RBP5.68□□□□□ -1.5
HDAC3-209ENST00000486618 OR2B8PP59922 312 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 CD81P60033 236 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 HBA1P69905 142 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 TRMT5Q32P41 509 aaKnown RBP5.68□□□□□ -1.5
HDAC3-209ENST00000486618 SMIM21Q3B7S5 101 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 OR2B11Q5JQS5 317 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 UBE2UQ5VVX9 321 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 SAXO2Q658L1 398 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 TYW3Q6IPR3 259 aaKnown RBP5.68□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF774Q6NX45 483 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 FAHD1Q6P587 224 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 SLC36A1Q7Z2H8 476 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 MRPL52Q86TS9 123 aaKnown RBP5.68□□□□□ -1.5
HDAC3-209ENST00000486618 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-209ENST00000486618 BOLLQ8N9W6 283 aaKnown RBP5.68□□□□□ -1.5
HDAC3-209ENST00000486618 OR10A6Q8NH74 314 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 C2CD4CQ8TF44 421 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 TWIST2Q8WVJ9 160 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 RORBQ92753 470 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 HIST1H2ACQ93077 130 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 ROPN1LQ96C74 230 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 YIPF6Q96EC8 236 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF486Q96H40 463 aaPredicted RBP5.68□□□□□ -1.5
HDAC3-209ENST00000486618 C14orf144Q96I85 54 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 MMP28Q9H239 520 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 OR51I1Q9H343 314 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF665Q9H7R5 613 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 CDH20Q9HBT6 801 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 DNAJC4Q9NNZ3 241 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 SPANXA1Q9NS26 97 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 CLN6Q9NWW5 311 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 STEAP1Q9UHE8 339 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 DHDHQ9UQ10 334 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 CEPT1Q9Y6K0 416 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 VWFP04275 2813 aa5.68□□□□□ -1.5
HDAC3-209ENST00000486618 TRRAPQ9Y4A5 3859 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 C17orf100A8MU93 164 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 A8MVM7 634 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 FTCDNL1E5RQL4 147 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 FAAHO00519 579 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 CPSF4O95639 269 aaKnown RBP5.67□□□□□ -1.5
HDAC3-209ENST00000486618 ATP6V1G2O95670 118 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 TMEM50AO95807 157 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 KNG1P01042 644 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 HLA-AP01891 365 aaKnown RBP5.67□□□□□ -1.5
HDAC3-209ENST00000486618 HLA-HP01893 362 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 MT-ND4P03905 459 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 ADH4P08319 380 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 OR12D1P0DN82 309 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 TMEM225BP0DP42 221 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 IFI30P13284 250 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 HIST1H1CP16403 213 aaKnown RBP5.67□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF43P17038 809 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 SERPINA2P20848 420 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 F2RP25116 425 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 ZFP36P26651 326 aaKnown RBP5.67□□□□□ -1.5
HDAC3-209ENST00000486618 EPHA3P29320 983 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 S100GP29377 79 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 ARRB2P32121 409 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 LIPAP38571 399 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 PMELP40967 661 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 IL5RAQ01344 420 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 GSG1Q2KHT4 349 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 LEMD1Q68G75 181 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 HIST2H2BDQ6DRA6 164 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 C19orf35Q6ZS72 473 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 LINGO2Q7L985 606 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 OLIG3Q7RTU3 272 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 OR2W3Q7Z3T1 314 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 MDP1Q86V88 176 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 C10orf107Q8IVU9 208 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 SKA3Q8IX90 412 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF440Q8IYI8 595 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF283Q8N7M2 679 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 STPG3Q8N7X2 389 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 SIGLECL1Q8N7X8 197 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 OR5AU1Q8NGC0 362 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 RAB8BQ92930 207 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 PELI1Q96FA3 418 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 TIMD4Q96H15 378 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 MBOAT4Q96T53 435 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 VPS25Q9BRG1 176 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 PDCD10Q9BUL8 212 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 C1orf50Q9BV19 199 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 SIAEQ9HAT2 523 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 NIT2Q9NQR4 276 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 PAK1IP1Q9NWT1 392 aaPredicted RBP5.67□□□□□ -1.5
HDAC3-209ENST00000486618 OR14J1Q9UGF5 321 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 HHLA2Q9UM44 414 aa5.67□□□□□ -1.5
HDAC3-209ENST00000486618 DNAJC15Q9Y5T4 150 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms