RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 GNG10P50151 68 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 RBM11P57052 281 aaKnown RBP14.21□□□□□ -0.13
COL6A1-204ENST00000486023 GABPB1Q06547 395 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-204ENST00000486023 INSL4Q14641 139 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 AWAT2Q6E213 333 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 UBALD1Q8TB05 177 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 MND1Q9BWT6 205 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 IDI2-AS1Q9NZ38 188 aa14.21□□□□□ -0.13
COL6A1-204ENST00000486023 ZNF780AO75290 641 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-204ENST00000486023 GPX5O75715 221 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 EFNB2P52799 333 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 BLCAPP62952 87 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 BDH1Q02338 343 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 MED22Q15528 200 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 RSBN1Q5VWQ0 802 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-204ENST00000486023 Q8NFD4 153 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 CAPSLQ8WWF8 208 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 KIRREL1Q96J84 757 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 DERL3Q96Q80 235 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 PRSS22Q9GZN4 317 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 CCDC90BQ9GZT6 254 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 BANF2Q9H503 90 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 FKBP14Q9NWM8 211 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 IL36GQ9NZH8 169 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 MEGF8Q7Z7M0 2845 aa14.2□□□□□ -0.14
COL6A1-204ENST00000486023 A0A1W2PPE3 182 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 MEGF11A6BM72 1044 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 BUB1B-PAK6H3BSN5 160 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 PIN1P1O15428 100 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 CRTAPO75718 401 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-204ENST00000486023 TSPAN15O95858 294 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 BRS3P32247 399 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 SSTR5P35346 364 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 CEACAM3P40198 252 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 VHLP40337 213 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 HERPUD1Q15011 391 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 HLA-DRB5Q30154 266 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 ACSM3Q53FZ2 586 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 LYG1Q8N1E2 194 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 SELENOIQ9C0D9 397 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 RANBP3Q9H6Z4 567 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-204ENST00000486023 ZNF702PQ9H963 129 aa14.19□□□□□ -0.14
COL6A1-204ENST00000486023 TMEM30CPA0ZSE6 113 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 H0YHG0 523 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 IL1AP01583 271 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 IGLV1-47P01700 117 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 HSMCR30P0CW71 290 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 FSTP19883 344 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 KCNJ3P48549 501 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 ARHGDIBP52566 201 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 GPR176Q14439 515 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 SPHARQ15513 63 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 TPTE2P1Q5T6R2 138 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 Q6ZS46 218 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 OR9G1Q8NH87 305 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 FAM46BQ96A09 425 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 PSG11Q9UQ72 335 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 TPRKBQ9Y3C4 175 aa14.18□□□□□ -0.14
COL6A1-204ENST00000486023 KIAA2026Q5HYC2 2103 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 MCRIP1C9JLW8 97 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 CSF1P09603 554 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 CGB3P0DN86 165 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 CGB7P0DN87 165 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 MAPK3P27361 379 aaPredicted RBP14.17□□□□□ -0.14
COL6A1-204ENST00000486023 CD34P28906 385 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 MNDAP41218 407 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 DYNLT3P51808 116 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 MPV17LQ2QL34 196 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 NHLRC3Q5JS37 347 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 FAM27D1Q5T7N8 215 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 CEACAM19Q7Z692 300 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 DTX3Q8N9I9 347 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 ARL11Q969Q4 196 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 TMEM203Q969S6 136 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 RPEQ96AT9 228 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 CREB3L1Q96BA8 519 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 MMP28Q9H239 520 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 MMP27Q9H306 513 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 PEX16Q9Y5Y5 336 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 VWFP04275 2813 aa14.17□□□□□ -0.14
COL6A1-204ENST00000486023 IGHV3-43A0A0B4J1X8 118 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 SH2D7A6NKC9 451 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-204ENST00000486023 J3QR06 171 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 CD1AP06126 327 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 IGHV3-43DP0DP04 118 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 C2orf68Q2NKX9 166 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 NSUN5P1Q3KNT7 163 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 TMEM95Q3KNT9 176 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 C9orf152Q5JTZ5 239 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 RBM48Q5RL73 367 aaKnown RBP14.16□□□□□ -0.14
COL6A1-204ENST00000486023 LIPKQ5VXJ0 399 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 RAB12Q6IQ22 244 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 C11orf88Q6PI97 169 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 LINC00596Q86U02 117 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 PRR18Q8N4B5 295 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 MS4A15Q8N5U1 240 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 OR10X1Q8NGY0 326 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 TOMM40LQ969M1 308 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 VCX3BQ9H321 246 aa14.16□□□□□ -0.14
COL6A1-204ENST00000486023 SERTAD4Q9NUC0 356 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms