RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 OLFML2AQ68BL7 652 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 SLC35E4Q6ICL7 350 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 SHISA2Q6UWI4 295 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 ZNF367Q7RTV3 350 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 SVOPQ8N4V2 548 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 OR13A1Q8NGR1 328 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 PLPPR1Q8TBJ4 325 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 CCDC107Q8WV48 283 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 FAM46BQ96A09 425 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 CST11Q9H112 138 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 IFT22Q9H7X7 185 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 RAB18Q9NP72 206 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 CALYQ9NYX4 217 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 IDI2-AS1Q9NZ38 188 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 GHRLQ9UBU3 117 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 MINOS1-NBL1R4GNA1 71 aa10.15□□□□□ -0.78
PTCD1-205ENST00000485746 TRAV39A0A0B4J263 110 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 CLPSL1A2RUU4 121 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A8PA6NJQ4 464 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 MPIG6BO95866 241 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 UCHL1P09936 223 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 UBBP0CG47 229 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 ARHGDIBP52566 201 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 TBCEQ15813 527 aaPredicted RBP10.14□□□□□ -0.79
PTCD1-205ENST00000485746 AANATQ16613 207 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 C17orf58Q2M2W7 97 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 RSBN1Q5VWQ0 802 aaPredicted RBP10.14□□□□□ -0.79
PTCD1-205ENST00000485746 BAIAP2L2Q6UXY1 529 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 LRRTM1Q86UE6 522 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 RFESDQ8TAC1 157 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 NCOR1P1Q9H4R4 102 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 PLGRKTQ9HBL7 147 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 ETAA1Q9NY74 926 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 ZNF581Q9P0T4 197 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 TRAPPC2LQ9UL33 140 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 RNF114Q9Y508 228 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 MMP24Q9Y5R2 645 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 PEX16Q9Y5Y5 336 aa10.14□□□□□ -0.79
PTCD1-205ENST00000485746 LEUTXA8MZ59 168 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 AIPO00170 330 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 F2RL2O00254 374 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 DENRO43583 198 aaKnown RBP10.13□□□□□ -0.79
PTCD1-205ENST00000485746 MRPS14O60783 128 aaKnown RBP10.13□□□□□ -0.79
PTCD1-205ENST00000485746 IL1AP01583 271 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 GZMHP20718 246 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 FUT3P21217 361 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 HTR2CP28335 458 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 GDNFP39905 211 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 CEACAM3P40198 252 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 RANBP1P43487 201 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 RAB13P51153 203 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 GABARAPL2P60520 117 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 RELBQ01201 579 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 RAB12Q6IQ22 244 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 DYNAPQ8N1N2 210 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 SGMS2Q8NHU3 365 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 ARL11Q969Q4 196 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 CREB3L1Q96BA8 519 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 AJUBAQ96IF1 538 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 NEDD4LQ96PU5 975 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 YTHDF1Q9BYJ9 559 aaKnown RBP10.13□□□□□ -0.79
PTCD1-205ENST00000485746 ZNF286AQ9HBT8 521 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 RAB9BQ9NP90 201 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 ACOT13Q9NPJ3 140 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 DPM3Q9P2X0 92 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 PITPNC1Q9UKF7 332 aa10.13□□□□□ -0.79
PTCD1-205ENST00000485746 AK6Q9Y3D8 172 aaKnown RBP10.13□□□□□ -0.79
PTCD1-205ENST00000485746 UBE2QL1A1L167 161 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A10PA6NDY2 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A18PA6NE21 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A16PA6NEW6 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A20PA6NIJ5 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A7PA6NKC0 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A22PA8MWA6 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A12PA8MX19 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A5PA8MXJ8 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A23PA8MXZ1 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 IGHV3-7P01780 117 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A15PP0C7V4 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A13PP0C7W8 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A14PP0C7W9 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 FAM90A24PP0C7X0 464 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 CALRP27797 417 aaKnown RBP10.12□□□□□ -0.79
PTCD1-205ENST00000485746 GABRA5P31644 462 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 BRS3P32247 399 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 GNG10P50151 68 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 GP2P55259 537 aaKnown RBP10.12□□□□□ -0.79
PTCD1-205ENST00000485746 EMX1Q04741 257 aaPredicted RBP10.12□□□□□ -0.79
PTCD1-205ENST00000485746 ARSJQ5FYB0 599 aaPredicted RBP10.12□□□□□ -0.79
PTCD1-205ENST00000485746 NKAPLQ5M9Q1 402 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 TMEM91Q6ZNR0 172 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 LIAT1Q6ZQX7 453 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 Q6ZSV7 163 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 TMEM104Q8NE00 496 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 OR4C13Q8NGP0 309 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 OR9G1Q8NH87 305 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 KCNG3Q8TAE7 436 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 CAPSLQ8WWF8 208 aa10.12□□□□□ -0.79
PTCD1-205ENST00000485746 AMMECR1Q9Y4X0 333 aaPredicted RBP10.12□□□□□ -0.79
PTCD1-205ENST00000485746 DNHD1Q96M86 4753 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms