RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 EGFEM1PQ0D2K5 195 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 IL13RA2Q14627 380 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 PIGYQ3MUY2 71 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 SATL1Q86VE3 508 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 C5orf56Q8N8D9 126 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 TNFAIP8L1Q8WVP5 186 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 GPER1Q99527 375 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 LINC00574Q9H8X3 128 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 ERVK13-1Q9NX77 482 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 ZNF581Q9P0T4 197 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 GMPPBQ9Y5P6 360 aa15.22■□□□□ 0.03
COL27A1-205ENST00000485397 A0A1W2PPE3 182 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 H3BNX3 289 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 RAB3AP20336 220 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 SSTR5P35346 364 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 SOX2P48431 317 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 THBS3P49746 956 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 MADCAM1Q13477 382 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 C8orf86Q6ZUL3 223 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 OR2W3Q7Z3T1 314 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 CBR4Q8N4T8 237 aa15.21■□□□□ 0.03
COL27A1-205ENST00000485397 SERPINE3A8MV23 424 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 HTR3BO95264 441 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 FADS2O95864 444 aaKnown RBP15.2■□□□□ 0.02
COL27A1-205ENST00000485397 IGKV1D-33P01593 117 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 IGKV1-33P01594 117 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 CCDC159P0C7I6 412 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 RAB7AP51149 207 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 GTF2A1P52655 376 aaPredicted RBP15.2■□□□□ 0.02
COL27A1-205ENST00000485397 GBX2P52951 348 aaPredicted RBP15.2■□□□□ 0.02
COL27A1-205ENST00000485397 ZNF529Q6P280 563 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 OR51D1Q8NGF3 324 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 HAVCR2Q8TDQ0 301 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 CHPT1Q8WUD6 406 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 RGP1Q92546 391 aaPredicted RBP15.2■□□□□ 0.02
COL27A1-205ENST00000485397 MYCBPQ99417 103 aaPredicted RBP15.2■□□□□ 0.02
COL27A1-205ENST00000485397 FAM192AQ9GZU8 254 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 TAS2R4Q9NYW5 299 aa15.2■□□□□ 0.02
COL27A1-205ENST00000485397 MAGEB3O15480 346 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 FGF16O43320 207 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 RPSAP08865 295 aaKnown RBP15.19■□□□□ 0.02
COL27A1-205ENST00000485397 MRPL28Q13084 256 aaKnown RBP15.19■□□□□ 0.02
COL27A1-205ENST00000485397 RSU1Q15404 277 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 ASCL4Q6XD76 172 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 OR8H3Q8N146 312 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 SUMF2Q8NBJ7 301 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 Q8NFD4 153 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 OR52I1Q8NGK6 324 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 OR10X1Q8NGY0 326 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 RHOXF1Q8NHV9 184 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 DPCDQ9BVM2 203 aaPredicted RBP15.19■□□□□ 0.02
COL27A1-205ENST00000485397 JAM3Q9BX67 310 aa15.19■□□□□ 0.02
COL27A1-205ENST00000485397 LINC01548A6NM66 108 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 NUDT19A8MXV4 375 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 CDRT1O95170 752 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 REG1BP48304 166 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 KCNJ3P48549 501 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 PAX5Q02548 391 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 SLC35E3Q7Z769 313 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 OR10A7Q8NGE5 316 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 DPF1Q92782 380 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 CPNE2Q96FN4 548 aaPredicted RBP15.18■□□□□ 0.02
COL27A1-205ENST00000485397 GPR61Q9BZJ8 451 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 ZFP57Q9NU63 452 aa15.18■□□□□ 0.02
COL27A1-205ENST00000485397 IGHV3-72A0A0B4J1Y9 119 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 IGHG2P01859 326 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 MYCNOSP40205 109 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 RAB40BQ12829 278 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 FAM53AQ6NSI3 398 aaPredicted RBP15.17■□□□□ 0.02
COL27A1-205ENST00000485397 SLC16A12Q6ZSM3 486 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 MOB3BQ86TA1 216 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 KLHL30-AS1Q8NEE0 82 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 UBALD1Q8TB05 177 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 Q96MT0 163 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 DUX3Q96PT4 197 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 P2RX4Q99571 388 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 SLC29A1Q99808 456 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 ING4Q9UNL4 249 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 ST3GAL6Q9Y274 331 aa15.17■□□□□ 0.02
COL27A1-205ENST00000485397 IGHV1-3A0A0C4DH29 117 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 CCRL2O00421 344 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 HSD17B6O14756 317 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 MPZL2O60487 215 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 LIMS3P0CW19 117 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 LIMS4P0CW20 117 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 SLC35B1P78383 322 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 CD69Q07108 199 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 ZNF816Q0VGE8 651 aaPredicted RBP15.16■□□□□ 0.02
COL27A1-205ENST00000485397 EBI3Q14213 229 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 XAF1Q6GPH4 301 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 STPG2Q8N412 459 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 EAF1Q96JC9 268 aaPredicted RBP15.16■□□□□ 0.02
COL27A1-205ENST00000485397 MRPS18AQ9NVS2 196 aaKnown RBP15.16■□□□□ 0.02
COL27A1-205ENST00000485397 FAM118AQ9NWS6 357 aa15.16■□□□□ 0.02
COL27A1-205ENST00000485397 OR7C1O76099 320 aaPredicted RBP15.15■□□□□ 0.02
COL27A1-205ENST00000485397 GAPDHP04406 335 aaKnown RBP15.15■□□□□ 0.02
COL27A1-205ENST00000485397 FOXRED2Q8IWF2 684 aa15.15■□□□□ 0.02
COL27A1-205ENST00000485397 GPR148Q8TDV2 347 aa15.15■□□□□ 0.02
COL27A1-205ENST00000485397 CCDC107Q8WV48 283 aa15.15■□□□□ 0.02
COL27A1-205ENST00000485397 APH1BQ8WW43 257 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms