RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	CRADD	P78560	199 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	CDK5	Q00535	292 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	ZBTB6	Q15916	424 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	FAM78A	Q5JUQ0	283 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	EPGN	Q6UW88	154 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	SAXO1	Q8IYX7	474 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	CA13	Q8N1Q1	262 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	TMEM239	Q8WW34	195 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF75A	Q96N20	296 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF251	Q9BRH9	671 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	COPS4	Q9BT78	406 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	PLA2G2F	Q9BZM2	168 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	RMND1	Q9NWS8	449 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	SDHAF2	Q9NX18	166 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	NBEA	Q8NFP9	2946 aa		4.13	□□□□□ -1.75
UBR3-210	ENST00000484596	NACA	E9PAV3	2078 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	KRBOX1	C9JBD0	128 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	PGRMC1	O00264	195 aa	Known RBP	4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	TNFRSF11B	O00300	401 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	TAAR5	O14804	337 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	SPAG7	O75391	227 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	GCM2	O75603	506 aa	Predicted RBP	4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	RCBTB2	O95199	551 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	LYPLA2	O95372	231 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	OR5AL1	P0C617	328 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF286B	P0CG31	522 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	SLC35E2B	P0CK96	405 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	LIPC	P11150	499 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	POLR2I	P36954	125 aa	Known RBP	4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	RANBP1	P43487	201 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	KIR3DL2	P43630	455 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	GALR1	P47211	349 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	RWDD2B	P57060	319 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	UBE2K	P61086	200 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	ESRRG	P62508	458 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	PITPNA	Q00169	270 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	IFITM3	Q01628	133 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	BNIP2	Q12982	314 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	UBE2S	Q16763	222 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	DEFB116	Q30KQ4	102 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	MPV17L2	Q567V2	206 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	STEAP4	Q687X5	459 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	SETD3	Q86TU7	594 aa	Predicted RBP	4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	PGAM4	Q8N0Y7	254 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	TMEM156	Q8N614	296 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	CCNYL1	Q8N7R7	359 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	DNAJB3	Q8WWF6	145 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	FOPNL	Q96NB1	174 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF382	Q96SR6	550 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	CIB1	Q99828	191 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	EMC6	Q9BV81	110 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	VCX	Q9H320	206 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	C8orf4	Q9NR00	106 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF222	Q9UK12	451 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	NDRG2	Q9UN36	371 aa	Known RBP	4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	TRIP11	Q15643	1979 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	RAD50	Q92878	1312 aa		4.12	□□□□□ -1.75
UBR3-210	ENST00000484596	MIA3	Q5JRA6	1907 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	FAM186A	A6NE01	2351 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	FREM2	Q5SZK8	3169 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	TRAV8-4	A0A0B4J246	113 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596		A0A0U1RQV1	116 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	TMEM213	A2RRL7	107 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	LRRN3	E7EW58	273 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	NDUFC2-KCTD14	E9PQ53	114 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	CYTH3	O43739	400 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	YIF1A	O95070	293 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596		P01737	135 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	GIMD1	P0DJR0	217 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	HLA-G	P17693	338 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	COIL	P38432	576 aa	Predicted RBP	4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	RGS6	P49758	472 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	MTPN	P58546	118 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	AP3S2	P59780	193 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	VSNL1	P62760	191 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	REEP5	Q00765	189 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	MGAT3	Q09327	533 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	C2orf80	Q0P641	193 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	NAB1	Q13506	487 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	PNOC	Q13519	176 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	UAP1	Q16222	522 aa	Predicted RBP	4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	WDFY1	Q8IWB7	410 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	RIMKLA	Q8IXN7	391 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	OR8K1	Q8NGG5	319 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	TEX47	Q8TBZ9	253 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	ZFAND1	Q8TCF1	268 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	SLC35B4	Q969S0	331 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	RAD51AP1	Q96B01	352 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	FLYWCH2	Q96CP2	140 aa	Known RBP	4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	STARD4	Q96DR4	205 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596		Q96MT0	163 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	C20orf144	Q9BQM9	153 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	OR52D1	Q9H346	318 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	PLEKHA1	Q9HB21	404 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	RBFOX1	Q9NWB1	397 aa	Known RBP	4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	VAX2	Q9UIW0	290 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	PSG11	Q9UQ72	335 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	ACOT9	Q9Y305	439 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	COL4A2	P08572	1712 aa		4.11	□□□□□ -1.75

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