RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 Q6YL49 198 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 OR2W3Q7Z3T1 314 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 MDFIQ99750 246 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 OR51E2Q9H255 320 aa17.06■□□□□ 0.32
SEC13-217ENST00000482647 ZMAT3Q9HA38 289 aaKnown RBP17.06■□□□□ 0.32
SEC13-217ENST00000482647 KBTBD11-OT1A0A1B0GTJ5 212 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 SHISA3A0PJX4 238 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 DNAJC9-AS1A6NH13 148 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 ZNF729A6NN14 1252 aaPredicted RBP17.05■□□□□ 0.32
SEC13-217ENST00000482647 CLDN34H7C241 214 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 PAHP00439 452 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 FBP1P09467 338 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 LGALS4P56470 323 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 UNC119Q13432 240 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 OR52W1Q6IF63 320 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 HEPN1Q6WQI6 88 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 FAM3DQ96BQ1 224 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 CHCHD6Q9BRQ6 235 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 STEAP1Q9UHE8 339 aa17.05■□□□□ 0.32
SEC13-217ENST00000482647 PDCD6O75340 191 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 GADD45AP24522 165 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 CDK2P24941 298 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 GLP1RP43220 463 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 CLDN12P56749 244 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 OR10A3P58181 314 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 UBA52P62987 128 aaKnown RBP17.04■□□□□ 0.32
SEC13-217ENST00000482647 SLC9A3R2Q15599 337 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 HES5Q5TA89 166 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 TPRA1Q86W33 373 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 OR11H6Q8NGC7 330 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 OR51D1Q8NGF3 324 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 OR13A1Q8NGR1 328 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 FAM216AQ8WUB2 273 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 KCTD7Q96MP8 289 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 NEDD4LQ96PU5 975 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 URM1Q9BTM9 101 aaKnown RBP17.04■□□□□ 0.32
SEC13-217ENST00000482647 TM2D1Q9BX74 207 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 TMEM133Q9H2Q1 129 aa17.04■□□□□ 0.32
SEC13-217ENST00000482647 LOC100506127A0A0U1RQW1 187 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 TRIM64CA6NLI5 447 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 IFITM5A6NNB3 132 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 HOXA3O43365 443 aaPredicted RBP17.03■□□□□ 0.32
SEC13-217ENST00000482647 CA11O75493 328 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 MT-ND4P03905 459 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 MELTFP08582 738 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 CGB3P0DN86 165 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 CGB7P0DN87 165 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 GZMHP20718 246 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 CFPP27918 469 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 C2orf76Q3KRA6 126 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 PRAMEF5Q5TYX0 476 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 SIGIRRQ6IA17 410 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 ZNF497Q6ZNH5 498 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 SSMEM1Q8WWF3 244 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 DUX5Q96PT3 197 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 KCNK15Q9H427 330 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 ETAA1Q9NY74 926 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 FBLN5Q9UBX5 448 aa17.03■□□□□ 0.32
SEC13-217ENST00000482647 MMP23AO75900 390 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 ARG1P05089 322 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 JUNBP17275 347 aaPredicted RBP17.02■□□□□ 0.32
SEC13-217ENST00000482647 DYNC1I2Q13409 638 aaKnown RBP17.02■□□□□ 0.32
SEC13-217ENST00000482647 C17orf58Q2M2W7 97 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 TIMM50Q3ZCQ8 353 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 NKAPLQ5M9Q1 402 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 GDPGP1Q6ZNW5 385 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 LDLRAD3Q86YD5 345 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 TMEM86BQ8N661 226 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 MRGPRDQ8TDS7 321 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 C19orf24Q9BVV8 132 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 LINC00574Q9H8X3 128 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 CALYQ9NYX4 217 aa17.02■□□□□ 0.32
SEC13-217ENST00000482647 IGHV2-26A0A0B4J1V2 119 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 TRAV39A0A0B4J263 110 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 AIPO00170 330 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 RNASE1P07998 156 aaKnown RBP17.01■□□□□ 0.31
SEC13-217ENST00000482647 OMGP23515 440 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 RTN4RL2Q86UN3 420 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 CCDC107Q8WV48 283 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 CLEC7AQ9BXN2 247 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 LPAR5Q9H1C0 372 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 DPAGT1Q9H3H5 408 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 RAB22AQ9UL26 194 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 POMT1Q9Y6A1 747 aa17.01■□□□□ 0.31
SEC13-217ENST00000482647 UBE2QL1A1L167 161 aa17■□□□□ 0.31
SEC13-217ENST00000482647 NOTOA8MTQ0 251 aa17■□□□□ 0.31
SEC13-217ENST00000482647 ODF3BA8MYP8 253 aa17■□□□□ 0.31
SEC13-217ENST00000482647 IL1AP01583 271 aa17■□□□□ 0.31
SEC13-217ENST00000482647 CHATP28329 748 aa17■□□□□ 0.31
SEC13-217ENST00000482647 BLVRBP30043 206 aaPredicted RBP17■□□□□ 0.31
SEC13-217ENST00000482647 IER3P46695 156 aa17■□□□□ 0.31
SEC13-217ENST00000482647 ZNF626Q68DY1 528 aa17■□□□□ 0.31
SEC13-217ENST00000482647 NR2C2APQ86WQ0 139 aa17■□□□□ 0.31
SEC13-217ENST00000482647 ABHD12Q8N2K0 398 aa17■□□□□ 0.31
SEC13-217ENST00000482647 FAM89BQ8N5H3 189 aa17■□□□□ 0.31
SEC13-217ENST00000482647 BEND2Q8NDZ0 799 aa17■□□□□ 0.31
SEC13-217ENST00000482647 OR10A7Q8NGE5 316 aa17■□□□□ 0.31
SEC13-217ENST00000482647 AJUBAQ96IF1 538 aa17■□□□□ 0.31
SEC13-217ENST00000482647 NICN1Q9BSH3 213 aa17■□□□□ 0.31
SEC13-217ENST00000482647 LIN7BQ9HAP6 207 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms