RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 STPG4Q8N801 248 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 ZNF519Q8TB69 540 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 NELFBQ8WX92 580 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 KRTAP4-9Q9BYQ8 210 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 IGKV1-8A0A0C4DH67 115 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 LYRM9A8MSI8 78 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 TNFRSF11BO00300 401 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 NUDT14O95848 222 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 OR8U8P0C7N1 319 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 GZMHP20718 246 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 GGT2P36268 569 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 CYB561P49447 251 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 RBX1P62877 108 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 TNFRSF9Q07011 255 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 CLINT1Q14677 625 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 SLC10A1Q14973 349 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 RGNQ15493 299 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 PDZD11Q5EBL8 140 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 KCTD16Q68DU8 428 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 MYPOPQ86VE0 399 aaPredicted RBP2.5□□□□□ -2.01
SMC6-208ENST00000481708 GPD1LQ8N335 351 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 OR13A1Q8NGR1 328 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 OR2A1Q8NGT9 310 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 ANKRD9Q96BM1 317 aaPredicted RBP2.5□□□□□ -2.01
SMC6-208ENST00000481708 TESCQ96BS2 214 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 ZIM3Q96PE6 472 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 TRIB3Q96RU7 358 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 TLNRD1Q9H1K6 362 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 FKRPQ9H9S5 495 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 PAK5Q9P286 719 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 V9GY05 133 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 HELZ2Q9BYK8 2649 aaKnown RBP2.5□□□□□ -2.01
SMC6-208ENST00000481708 CELSR2Q9HCU4 2923 aa2.5□□□□□ -2.01
SMC6-208ENST00000481708 URB1O60287 2271 aaKnown RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 TET2Q6N021 2002 aaPredicted RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 ACOX3O15254 700 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SLC22A5O76082 557 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SEMG1P04279 462 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 FOLR2P14207 255 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 ZNF708P17019 499 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 ARR3P36575 388 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 ZNF138P52744 262 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 MRPS25P82663 173 aaKnown RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 BAXQ07812 192 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 EGFEM1PQ0D2K5 195 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 ADAMTSL4-AS1Q5T5F5 129 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 LCE5AQ5TCM9 118 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 C11orf53Q8IXP5 236 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 DCAF4L2Q8NA75 395 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 GATD1Q8NB37 220 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 YIPF5Q969M3 257 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 LRRC61Q9BV99 259 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 YTHDF1Q9BYJ9 559 aaKnown RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 TMPRSS5Q9H3S3 457 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 KNTC1P50748 2209 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 ZNF593O00488 134 aaPredicted RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 ZNF253O75346 499 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 CRLF1O75462 422 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 OR5AL1P0C617 328 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 TAC1P20366 129 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SLC2A5P22732 501 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 ALDH3A1P30838 453 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 RAB38P57729 211 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 RPS21P63220 83 aaKnown RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 FKBP3Q00688 224 aaKnown RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 TGIF1Q15583 401 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 GUK1Q16774 197 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SPIN3Q5JUX0 258 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 TMEM42Q69YG0 159 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 DHRS4L2Q6PKH6 230 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 GDPD3Q7L5L3 318 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 LGI3Q8N145 548 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 UMODL1-AS1Q8N2C9 162 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 OR8G5Q8NG78 346 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 OR10G7Q8NGN6 311 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 OR2T4Q8NH00 348 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 MAGEB18Q96M61 343 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 STACQ99469 402 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SYT15Q9BQS2 421 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 VSIRQ9H7M9 311 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 DHRS4-AS1Q9P1J3 65 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 CABIN1Q9Y6J0 2220 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 PLECQ15149 4684 aaKnown RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 IGHV4-4A0A075B6R2 117 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 IGHV5-10-1A0A0J9YXX1 117 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 MPTX1A8MV57 137 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 ZNF878C9JN71 531 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 VDAC1P21796 283 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 RPL12P30050 165 aaKnown RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 MPIP34949 423 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 NANOS3P60323 173 aaKnown RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 SLC35A1P78382 337 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SMAGPQ0VAQ4 97 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 KRR1Q13601 381 aaKnown RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 BRMS1LQ5PSV4 323 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 KPRPQ5T749 579 aaPredicted RBP2.49□□□□□ -2.01
SMC6-208ENST00000481708 OLFML2AQ68BL7 652 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 FAM220AQ7Z4H9 259 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 TRAPPC5Q8IUR0 188 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 OR4F15Q8NGB8 312 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms