RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 DOCK8Q8NF50 2099 aa3.45□□□□□ -1.86
COPA-203ENST00000481040 DNMT1P26358 1616 aaKnown RBP3.44□□□□□ -1.86
COPA-203ENST00000481040 AHDC1Q5TGY3 1603 aaPredicted RBP3.44□□□□□ -1.86
COPA-203ENST00000481040 CHD2O14647 1828 aaKnown RBP3.44□□□□□ -1.86
COPA-203ENST00000481040 CENPVL3A0A0U1RRI6 287 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 A0A1W2PQL4 384 aaPredicted RBP3.44□□□□□ -1.86
COPA-203ENST00000481040 ARL6IP5O75915 188 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 ADRA2AP08913 450 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 IL1RNP18510 177 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 PSMA1P25786 263 aaKnown RBP3.44□□□□□ -1.86
COPA-203ENST00000481040 HSPA13P48723 471 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 ELF3P78545 371 aaPredicted RBP3.44□□□□□ -1.86
COPA-203ENST00000481040 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 FAM222AQ5U5X8 452 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 SYPL2Q5VXT5 272 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 TNFAIP8L2Q6P589 184 aaPredicted RBP3.44□□□□□ -1.86
COPA-203ENST00000481040 Q6ZR03 302 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 FAM19A3Q7Z5A8 133 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 SLC25A46Q96AG3 418 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 ZIM3Q96PE6 472 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 TIPINQ9BVW5 301 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 MS4A8Q9BY19 250 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 PRR34Q9NV39 138 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 ZNF223Q9UK11 482 aaPredicted RBP3.44□□□□□ -1.86
COPA-203ENST00000481040 TP53TG3Q9ULZ0 132 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 SLC22A13Q9Y226 551 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 ALG5Q9Y673 324 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 PTPRTO14522 1441 aa3.44□□□□□ -1.86
COPA-203ENST00000481040 CROCCQ5TZA2 2017 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 A0A1W2PP64 1363 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 IGLV4-69A0A075B6H9 119 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 TMEM250H0YL14 139 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 M0QYV0 167 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 DCTN3O75935 186 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 LINC00614P0C842 121 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 MP68P56378 58 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 LSM6P62312 80 aaKnown RBP3.43□□□□□ -1.86
COPA-203ENST00000481040 FMODQ06828 376 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 TMEM241Q24JQ0 296 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 TTMPQ5BVD1 217 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 CENPWQ5EE01 88 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 SPATA31B1PQ5VZV4 182 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 VN1R4Q7Z5H5 301 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 STK40Q8N2I9 435 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 OR2M3Q8NG83 312 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 OR10G2Q8NGC3 310 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 TLCD1Q96CP7 247 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 THTPAQ9BU02 230 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 PARVAQ9NVD7 372 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 GLS2Q9UI32 602 aa3.43□□□□□ -1.86
COPA-203ENST00000481040 IGHV1-3A0A0C4DH29 117 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 RGS5O15539 181 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 CXorf1O96002 111 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 CCNE2O96020 404 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 HLA-DRAP01903 254 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 MIPP30301 263 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 SLC6A1P30531 599 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 EVI2BP34910 448 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 H2BFSP57053 126 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 RAB2AP61019 212 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 Q5W150 140 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 TMEM215Q68D42 235 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 MARCH3Q86UD3 253 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 COMMD7Q86VX2 200 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 TRAPPC5Q8IUR0 188 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 ZFP82Q8N141 532 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 OR1M1Q8NGA1 313 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 OR2K2Q8NGT1 345 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 OR10D3Q8NH80 312 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 OPTNQ96CV9 577 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 OTUB2Q96DC9 234 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 GPR82Q96P67 336 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 OR51B6Q9H340 312 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 UBQLN4Q9NRR5 601 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 EVC2Q86UK5 1308 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 IGSF9BQ9UPX0 1349 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 SVILO95425 2214 aa3.42□□□□□ -1.86
COPA-203ENST00000481040 SNAPC4Q5SXM2 1469 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 WI2-2373I1.2A0A1W2PRP0 233 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 MFNGO00587 321 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 KCNK2O95069 426 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 TCRBP04435 133 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 IFNA16P05015 189 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 HIST1H1EP10412 219 aaKnown RBP3.41□□□□□ -1.86
COPA-203ENST00000481040 CD28P10747 220 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 GABRA1P14867 456 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 CXCL3P19876 107 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 MDKP21741 143 aaPredicted RBP3.41□□□□□ -1.86
COPA-203ENST00000481040 GADD45AP24522 165 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 SULT1A2P50226 295 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 ZNF133P52736 654 aaPredicted RBP3.41□□□□□ -1.86
COPA-203ENST00000481040 TCL1AP56279 114 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 PFN3P60673 137 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 CXCR4P61073 352 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 MRPS25P82663 173 aaKnown RBP3.41□□□□□ -1.86
COPA-203ENST00000481040 AESQ08117 197 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 PDK2Q15119 407 aa3.41□□□□□ -1.86
COPA-203ENST00000481040 TMEM176BQ3YBM2 270 aaPredicted RBP3.41□□□□□ -1.86
COPA-203ENST00000481040 ZNF658BQ4V348 819 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms