RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 DANCRP0C864 163 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 GLP1RP43220 463 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 OR2B8PP59922 312 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 RUNX1Q01196 453 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 RNFT1Q5M7Z0 435 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 OR2T2Q6IF00 324 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 DBX2Q6ZNG2 339 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 TMPRSS7Q7RTY8 843 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 FAM24BQ8N5W8 94 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 SFT2D1Q8WV19 159 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 HIST1H2BAQ96A08 127 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 SCRT1Q9BWW7 348 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 PLEKHA2Q9HB19 425 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 BIN3Q9NQY0 253 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 COA4Q9NYJ1 87 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 DCHS1Q96JQ0 3298 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 CHD3Q12873 2000 aaKnown RBP9.24□□□□□ -0.93
VPS52-217ENST00000478934 CACNA1DQ01668 2161 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 IGSF23A1L1A6 192 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 GPR137BO60478 399 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 SYNGR4O95473 234 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 PLA2G5P39877 138 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 P2RY1P47900 373 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 EWSR1Q01844 656 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS52-217ENST00000478934 SLC16A13Q7RTY0 426 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.24□□□□□ -0.93
VPS52-217ENST00000478934 ZDHHC23Q8IYP9 409 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 LGI3Q8N145 548 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 TMEM171Q8WVE6 324 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 APH1AQ96BI3 265 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 POM121L2Q96KW2 1035 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 SUCNR1Q9BXA5 334 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 Q9N2K0 584 aa9.24□□□□□ -0.93
VPS52-217ENST00000478934 UBE2J1Q9Y385 318 aaPredicted RBP9.24□□□□□ -0.93
VPS52-217ENST00000478934 MRPS18CQ9Y3D5 142 aaKnown RBP9.24□□□□□ -0.93
VPS52-217ENST00000478934 SLC22A20A6NK97 555 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 CD300LBA8K4G0 201 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 UMAD1C9J7I0 102 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 ADAM20O43506 726 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 CELA3BP08861 270 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 CD59P13987 128 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 CA6P23280 308 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 HOXA1P49639 335 aaPredicted RBP9.23□□□□□ -0.93
VPS52-217ENST00000478934 MEOX1P50221 254 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 CEACAM21Q3KPI0 293 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 OR4D5Q8NGN0 318 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 LILRB1Q8NHL6 650 aaPredicted RBP9.23□□□□□ -0.93
VPS52-217ENST00000478934 ZNF391Q9UJN7 358 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 PUS1Q9Y606 427 aaKnown RBP eCLIP9.23□□□□□ -0.93
VPS52-217ENST00000478934 DOCK11Q5JSL3 2073 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 BORCS7-ASMTA0A0B4J1R7 106 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 CDX4O14627 284 aaPredicted RBP9.23□□□□□ -0.93
VPS52-217ENST00000478934 TMEM50AO95807 157 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 EPHA1P21709 976 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 FGF12P61328 243 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 ERVS71-1P61550 626 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 PMP22Q01453 160 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 DPPA2Q7Z7J5 298 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 PRR18Q8N4B5 295 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 LRTM2Q8N967 370 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 BOD1Q96IK1 185 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 SYT3Q9BQG1 590 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 TMEM222Q9H0R3 208 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 SMCO4Q9NRQ5 59 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 LUZP4Q9P127 313 aa9.23□□□□□ -0.93
VPS52-217ENST00000478934 ZNF724A8MTY0 619 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 TRAPPC2LH3BP13 241 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 IL18BPO95998 194 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 NAPSAO96009 420 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 HAGHQ16775 308 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 ADAM5Q6NVV9 412 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 ZNF695Q8IW36 515 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 SELENOHQ8IZQ5 122 aaKnown RBP9.22□□□□□ -0.93
VPS52-217ENST00000478934 SUMF2Q8NBJ7 301 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 LYPD6BQ8NI32 183 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 GINS3Q9BRX5 216 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 GLRX2Q9NS18 164 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 B4GALT7Q9UBV7 327 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 A0A0G2JRQ6 117 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 HEXAP06865 529 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 ACAA1P09110 424 aaPredicted RBP9.22□□□□□ -0.93
VPS52-217ENST00000478934 ATP6V0CP27449 155 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 SRSF6Q13247 344 aaKnown RBP9.22□□□□□ -0.93
VPS52-217ENST00000478934 HNF4GQ14541 408 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 GNMTQ14749 295 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 ALKBH6Q3KRA9 238 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 P4HA3Q7Z4N8 544 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 ODF3L1Q8IXM7 274 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 OR2C3Q8N628 320 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 OR2G3Q8NGZ4 309 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 NANPQ8TBE9 248 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 IL1F10Q8WWZ1 152 aa9.22□□□□□ -0.93
VPS52-217ENST00000478934 APOBEC3DQ96AK3 386 aaPredicted RBP9.22□□□□□ -0.93
VPS52-217ENST00000478934 TRAV24A0A0B4J272 114 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 ZNF727A8MUV8 499 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 TRDCB7Z8K6 153 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 TNFSF15O95150 251 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 MT-CO3P00414 261 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 TK1P04183 234 aa9.21□□□□□ -0.93
VPS52-217ENST00000478934 SEC11BP0C7V7 166 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms