RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 PRSS48Q7RTY5 328 aa12.73□□□□□ -0.37
GARNL3-215ENST00000478702 PLPPR1Q8TBJ4 325 aa12.73□□□□□ -0.37
GARNL3-215ENST00000478702 CNBD2Q96M20 576 aa12.73□□□□□ -0.37
GARNL3-215ENST00000478702 TMED9Q9BVK6 235 aa12.73□□□□□ -0.37
GARNL3-215ENST00000478702 DPCDQ9BVM2 203 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-215ENST00000478702 PCDHB16Q9NRJ7 776 aa12.73□□□□□ -0.37
GARNL3-215ENST00000478702 RAB26Q9ULW5 256 aa12.73□□□□□ -0.37
GARNL3-215ENST00000478702 MINOS1-NBL1R4GNA1 71 aa12.73□□□□□ -0.37
GARNL3-215ENST00000478702 GEMIN2O14893 280 aaKnown RBP12.72□□□□□ -0.37
GARNL3-215ENST00000478702 OR7C1O76099 320 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-215ENST00000478702 GTF2F2P13984 249 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 VHLP40337 213 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 GP2P55259 537 aaKnown RBP12.72□□□□□ -0.37
GARNL3-215ENST00000478702 C17orf58Q2M2W7 97 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 ACSM3Q53FZ2 586 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 FAM27D1Q5T7N8 215 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 AWAT2Q6E213 333 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 GLIPR1L1Q6UWM5 242 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 UNQ9370/PRO34162Q6UXP9 181 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 BAIAP2L2Q6UXY1 529 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 LIAT1Q6ZQX7 453 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 SUMF2Q8NBJ7 301 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 OR4D6Q8NGJ1 314 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 OR4P4Q8NGL7 312 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 OR13A1Q8NGR1 328 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 UFD1Q92890 307 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 MALSU1Q96EH3 234 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 UQCC2Q9BRT2 126 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 ISYNA1Q9NPH2 558 aa12.72□□□□□ -0.37
GARNL3-215ENST00000478702 DNAH3Q8TD57 4116 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 MEIKINA0A087WXM9 373 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 A0A087X0M5 115 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 A0A1B0GX30 115 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 OPN1MWP04001 364 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 OPN1MW2P0DN77 364 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 OPN1MW3P0DN78 364 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 CGB3P0DN86 165 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 CGB7P0DN87 165 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 MLLT11Q13015 90 aaPredicted RBP12.71□□□□□ -0.37
GARNL3-215ENST00000478702 TPBGQ13641 420 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 TBCEQ15813 527 aaPredicted RBP12.71□□□□□ -0.37
GARNL3-215ENST00000478702 LY6EQ16553 131 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 RBM48Q5RL73 367 aaKnown RBP12.71□□□□□ -0.37
GARNL3-215ENST00000478702 LIPKQ5VXJ0 399 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 RTN4RL2Q86UN3 420 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 PIFOQ8TCI5 191 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 PHYHIPQ92561 330 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 MRPS24Q96EL2 167 aaKnown RBP12.71□□□□□ -0.37
GARNL3-215ENST00000478702 BARHL1Q9BZE3 327 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 ZNF286AQ9HBT8 521 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 CALYQ9NYX4 217 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 RCC2Q9P258 522 aaKnown RBP12.71□□□□□ -0.37
GARNL3-215ENST00000478702 FBLN5Q9UBX5 448 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 BLOC1S6Q9UL45 172 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 SIGLEC9Q9Y336 463 aa12.71□□□□□ -0.37
GARNL3-215ENST00000478702 KBTBD11-OT1A0A1B0GTJ5 212 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 MEGF11A6BM72 1044 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 FAM172BPA6NC97 362 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 CHST1O43916 411 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 IL1AP01583 271 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 IGLV1-47P01700 117 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 UCHL1P09936 223 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 DYNLT3P51808 116 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 HERPUD1Q15011 391 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 FAM189A2Q15884 450 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 SSX2Q16385 188 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 PLA1AQ53H76 456 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 LRRTM1Q86UE6 522 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 ABHD12Q8N2K0 398 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 NDNFQ8TB73 568 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 KIRREL1Q96J84 757 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 CCDC90BQ9GZT6 254 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 LINC00574Q9H8X3 128 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 RAB18Q9NP72 206 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 TCF19Q9Y242 345 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 NBEAL2Q6ZNJ1 2754 aa12.7□□□□□ -0.38
GARNL3-215ENST00000478702 TMEM30CPA0ZSE6 113 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A10PA6NDY2 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A18PA6NE21 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A16PA6NEW6 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A20PA6NIJ5 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A7PA6NKC0 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A22PA8MWA6 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A12PA8MX19 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A5PA8MXJ8 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A23PA8MXZ1 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A15PP0C7V4 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A13PP0C7W8 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A14PP0C7W9 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 FAM90A24PP0C7X0 464 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 HSMCR30P0CW71 290 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 MGMTP16455 207 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 HTR1DP28221 377 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 MAP2K4P45985 399 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 EFNB2P52799 333 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 RPS25P62851 125 aaKnown RBP12.69□□□□□ -0.38
GARNL3-215ENST00000478702 HSD17B12Q53GQ0 312 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 ATAD3CQ5T2N8 411 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 ZNF565Q8N9K5 539 aa12.69□□□□□ -0.38
GARNL3-215ENST00000478702 TMEM104Q8NE00 496 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms