RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 TMEM11P17152 192 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 MADCAM1Q13477 382 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 EBI3Q14213 229 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 IL13RA2Q14627 380 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 LPCAT4Q643R3 524 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 C8orf86Q6ZUL3 223 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 OR10K1Q8NGX5 313 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 HAVCR2Q8TDQ0 301 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 MRGPRDQ8TDS7 321 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 CHPT1Q8WUD6 406 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 RGP1Q92546 391 aaPredicted RBP13.18□□□□□ -0.3
TRIM13-208ENST00000478111 P2RX4Q99571 388 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 BARHL1Q9BZE3 327 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 ERVK13-1Q9NX77 482 aa13.18□□□□□ -0.3
TRIM13-208ENST00000478111 A0A1W2PPE3 182 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 TMEM212A6NML5 194 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 H3BNX3 289 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 IGKV1D-33P01593 117 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 IGKV1-33P01594 117 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 SSTR5P35346 364 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 GNG10P50151 68 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 RAB7AP51149 207 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 ALDH3A2P51648 485 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 HES1Q14469 280 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 LTC4SQ16873 150 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 PIGYQ3MUY2 71 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 SLC16A12Q6ZSM3 486 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 OR8H3Q8N146 312 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 OR10A7Q8NGE5 316 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 OR5AK2Q8NH90 309 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 TNFAIP8L1Q8WVP5 186 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 B9D2Q9BPU9 175 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 AMBNQ9NP70 447 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 ZFP57Q9NU63 452 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 DHDHQ9UQ10 334 aa13.17□□□□□ -0.3
TRIM13-208ENST00000478111 HUWE1Q7Z6Z7 4374 aaKnown RBP13.17□□□□□ -0.3
TRIM13-208ENST00000478111 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
TRIM13-208ENST00000478111 SERPINE3A8MV23 424 aa13.16□□□□□ -0.3
TRIM13-208ENST00000478111 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
TRIM13-208ENST00000478111 CCDC159P0C7I6 412 aa13.16□□□□□ -0.3
TRIM13-208ENST00000478111 RAB3AP20336 220 aa13.16□□□□□ -0.3
TRIM13-208ENST00000478111 MYCNOSP40205 109 aa13.16□□□□□ -0.3
TRIM13-208ENST00000478111 KCNJ3P48549 501 aa13.16□□□□□ -0.3
TRIM13-208ENST00000478111 ZNF816Q0VGE8 651 aaPredicted RBP13.16□□□□□ -0.3
TRIM13-208ENST00000478111 RHOXF1Q8NHV9 184 aa13.16□□□□□ -0.3
TRIM13-208ENST00000478111 MRPL48Q96GC5 212 aaKnown RBP13.16□□□□□ -0.3
TRIM13-208ENST00000478111 GPR61Q9BZJ8 451 aa13.16□□□□□ -0.3
TRIM13-208ENST00000478111 ORC6Q9Y5N6 252 aa13.16□□□□□ -0.3
TRIM13-208ENST00000478111 DYNC1I1O14576 645 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 FADS2O95864 444 aaKnown RBP13.15□□□□□ -0.3
TRIM13-208ENST00000478111 SLC6A1P30531 599 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 GTF2A1P52655 376 aaPredicted RBP13.15□□□□□ -0.3
TRIM13-208ENST00000478111 MRPL28Q13084 256 aaKnown RBP13.15□□□□□ -0.3
TRIM13-208ENST00000478111 SLC35E3Q7Z769 313 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 SATL1Q86VE3 508 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 STPG2Q8N412 459 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 CBR4Q8N4T8 237 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 COMMD1Q8N668 190 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 Q8N6K4 173 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 SUMF2Q8NBJ7 301 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 OR52I1Q8NGK6 324 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 TSEN15Q8WW01 171 aaKnown RBP13.15□□□□□ -0.3
TRIM13-208ENST00000478111 DPF1Q92782 380 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 MCRIP2Q9BUT9 160 aaKnown RBP13.15□□□□□ -0.3
TRIM13-208ENST00000478111 DPCDQ9BVM2 203 aaPredicted RBP13.15□□□□□ -0.3
TRIM13-208ENST00000478111 JAM3Q9BX67 310 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 IFT22Q9H7X7 185 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIM13-208ENST00000478111 MRPS18AQ9NVS2 196 aaKnown RBP13.15□□□□□ -0.3
TRIM13-208ENST00000478111 GMPPBQ9Y5P6 360 aa13.15□□□□□ -0.3
TRIM13-208ENST00000478111 IGHV1-3A0A0C4DH29 117 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 H0YHG0 523 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 C15orf65H3BRN8 121 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 HSD17B6O14756 317 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 CIB2O75838 187 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 CDRT1O95170 752 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 HTR3BO95264 441 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 LIMS3P0CW19 117 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 LIMS4P0CW20 117 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 VSIG8P0DPA2 414 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 SOX2P48431 317 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 CD69Q07108 199 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 RAB40BQ12829 278 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 RSU1Q15404 277 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 NHLRC3Q5JS37 347 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 XAF1Q6GPH4 301 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 FAM53AQ6NSI3 398 aaPredicted RBP13.14□□□□□ -0.31
TRIM13-208ENST00000478111 KLHL30-AS1Q8NEE0 82 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 OR10X1Q8NGY0 326 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 RAX2Q96IS3 184 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 EAF1Q96JC9 268 aaPredicted RBP13.14□□□□□ -0.31
TRIM13-208ENST00000478111 DUX3Q96PT4 197 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 MYCBPQ99417 103 aaPredicted RBP13.14□□□□□ -0.31
TRIM13-208ENST00000478111 GPER1Q99527 375 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 TAS2R4Q9NYW5 299 aa13.14□□□□□ -0.31
TRIM13-208ENST00000478111 DNAH7Q8WXX0 4024 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 IGHV3-72A0A0B4J1Y9 119 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 NUDT19A8MXV4 375 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 REG1BP48304 166 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms