RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 STARD4Q96DR4 205 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 POLDIP2Q9Y2S7 368 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 TMED3Q9Y3Q3 217 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 MBD3L4A6NDZ8 208 aaPredicted RBP9.75□□□□□ -0.85
NUP188-205ENST00000477069 MBD3L3A6NE82 208 aaPredicted RBP9.75□□□□□ -0.85
NUP188-205ENST00000477069 MBD3L5A6NJ08 208 aaPredicted RBP9.75□□□□□ -0.85
NUP188-205ENST00000477069 TMEM210A6NLX4 147 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 H0YL77 283 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 GPR31O00270 319 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 MLNRO43193 412 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 TMEM268Q5VZI3 342 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 ZADH2Q8N4Q0 377 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 OR1S2Q8NGQ3 325 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 LILRB1Q8NHL6 650 aaPredicted RBP9.75□□□□□ -0.85
NUP188-205ENST00000477069 MBD3L2Q8NHZ7 208 aaPredicted RBP9.75□□□□□ -0.85
NUP188-205ENST00000477069 TMED6Q8WW62 240 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 C11orf1Q9H5F2 150 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 PCDHB10Q9UN67 800 aa9.75□□□□□ -0.85
NUP188-205ENST00000477069 LSM5Q9Y4Y9 91 aaKnown RBP9.75□□□□□ -0.85
NUP188-205ENST00000477069 DEGS1O15121 323 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 OR2H2O95918 312 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 RCC1P18754 421 aaPredicted RBP9.74□□□□□ -0.85
NUP188-205ENST00000477069 MDH2P40926 338 aaKnown RBP9.74□□□□□ -0.85
NUP188-205ENST00000477069 SRPXP78539 464 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 RPL7L1Q6DKI1 246 aaKnown RBP9.74□□□□□ -0.85
NUP188-205ENST00000477069 ZNF497Q6ZNH5 498 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 CXorf67Q86X51 503 aaPredicted RBP9.74□□□□□ -0.85
NUP188-205ENST00000477069 H1FOOQ8IZA3 346 aaPredicted RBP9.74□□□□□ -0.85
NUP188-205ENST00000477069 PLPPR1Q8TBJ4 325 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 SECTM1Q8WVN6 248 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 PLEKHA2Q9HB19 425 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 ZNF71Q9NQZ8 489 aaPredicted RBP9.74□□□□□ -0.85
NUP188-205ENST00000477069 E5RGE8 158 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 WDR1O75083 606 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 GAPDHP04406 335 aaKnown RBP9.74□□□□□ -0.85
NUP188-205ENST00000477069 HOXD4P09016 255 aaPredicted RBP9.74□□□□□ -0.85
NUP188-205ENST00000477069 CECR9P0C854 216 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 SMCO1Q147U7 214 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 MST1LQ2TV78 715 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 Q6ZS92 163 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 C11orf53Q8IXP5 236 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 RNF141Q8WVD5 230 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 FBXL17Q9UF56 701 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 NSG2Q9Y328 171 aa9.74□□□□□ -0.85
NUP188-205ENST00000477069 A0A1B0GWJ7 208 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 CDIPTO14735 213 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 CDS2O95674 445 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 UCP1P25874 307 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 PLA2G5P39877 138 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 SELENOHQ8IZQ5 122 aaKnown RBP9.73□□□□□ -0.85
NUP188-205ENST00000477069 ZNF610Q8N9Z0 462 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 DMBX1Q8NFW5 382 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 TLNRD1Q9H1K6 362 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 OPN3Q9H1Y3 402 aaPredicted RBP9.73□□□□□ -0.85
NUP188-205ENST00000477069 PIGMQ9H3S5 423 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 CCL28Q9NRJ3 127 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 PURGQ9UJV8 347 aaKnown RBP9.73□□□□□ -0.85
NUP188-205ENST00000477069 CLEC18AA5D8T8 446 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 ZSCAN5BA6NJL1 495 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 SCGB1D2O95969 90 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 WNT2P09544 360 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 ZNF44P15621 663 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 KITLGP21583 273 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 TUBG1P23258 451 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 TMEM33P57088 247 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 OR8G1Q15617 311 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 SPIN3Q5JUX0 258 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 ZNF565Q8N9K5 539 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 CLEC18CQ8NCF0 446 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 GALNT11Q8NCW6 608 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 OR8G5Q8NG78 346 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 SUN5Q8TC36 379 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 ERGIC1Q969X5 290 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 ARV1Q9H2C2 271 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 OBP2BQ9NPH6 170 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 TUBG2Q9NRH3 451 aa9.73□□□□□ -0.85
NUP188-205ENST00000477069 RCL1Q9Y2P8 373 aaKnown RBP9.73□□□□□ -0.85
NUP188-205ENST00000477069 BSNQ9UPA5 3926 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 IGHV1-18A0A0C4DH31 117 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 DUXBA0A1W2PPF3 345 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 RAB19A4D1S5 217 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.72□□□□□ -0.85
NUP188-205ENST00000477069 IGLV2-14P01704 120 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 HOXC12P31275 282 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 MEX3BQ6ZN04 569 aaKnown RBP9.72□□□□□ -0.85
NUP188-205ENST00000477069 MOB1BQ7L9L4 216 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 ZFP57Q9NU63 452 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 MBNL3Q9NUK0 354 aaKnown RBP9.72□□□□□ -0.85
NUP188-205ENST00000477069 ASF1BQ9NVP2 202 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 TAS2R3Q9NYW6 316 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 PLA2G2EQ9NZK7 142 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 OR2W1Q9Y3N9 320 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 WIPI2Q9Y4P8 454 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 POMT1Q9Y6A1 747 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 NKX2-6A6NCS4 301 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 B8ZZF3 427 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 SIRPB1O00241 398 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 EIF2S3P41091 472 aaKnown RBP9.72□□□□□ -0.85
NUP188-205ENST00000477069 P2RY6Q15077 328 aa9.72□□□□□ -0.85
NUP188-205ENST00000477069 NMSQ5H8A3 153 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms