RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 DPCDQ9BVM2 203 aaPredicted RBP8.27□□□□□ -1.09
CCM2-208ENST00000476594 PRSS22Q9GZN4 317 aa8.27□□□□□ -1.09
CCM2-208ENST00000476594 CST11Q9H112 138 aa8.27□□□□□ -1.09
CCM2-208ENST00000476594 CALYQ9NYX4 217 aa8.27□□□□□ -1.09
CCM2-208ENST00000476594 KIF25Q9UIL4 384 aa8.27□□□□□ -1.09
CCM2-208ENST00000476594 HILPDAQ9Y5L2 63 aa8.27□□□□□ -1.09
CCM2-208ENST00000476594 SIRT4Q9Y6E7 314 aaPredicted RBP8.27□□□□□ -1.09
CCM2-208ENST00000476594 MGAM2Q2M2H8 2515 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 A0A087X0M5 115 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 TRBV5-7A0A0A0MS05 114 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 TRAV24A0A0B4J272 114 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 A0A1B0GX30 115 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A10PA6NDY2 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A18PA6NE21 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A16PA6NEW6 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 ERICH4A6NGS2 130 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A20PA6NIJ5 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A7PA6NKC0 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A22PA8MWA6 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A12PA8MX19 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A5PA8MXJ8 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A23PA8MXZ1 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 MCRIP1C9JLW8 97 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 CA11O75493 328 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 IL1AP01583 271 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 LPLP06858 475 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A15PP0C7V4 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A13PP0C7W8 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A14PP0C7W9 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FAM90A24PP0C7X0 464 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 PSMA1P25786 263 aaKnown RBP8.26□□□□□ -1.09
CCM2-208ENST00000476594 GPR50Q13585 617 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 TRAM1Q15629 374 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 C2orf68Q2NKX9 166 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 HLA-DRB5Q30154 266 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 TMEM30BQ3MIR4 351 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 PIGYQ3MUY2 71 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 GLT8D1Q68CQ7 371 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 TRAT1Q6PIZ9 186 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 GLIPR1L1Q6UWM5 242 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 TREML4Q6UXN2 200 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 RNF144BQ7Z419 303 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 SUMF2Q8NBJ7 301 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 OR4P4Q8NGL7 312 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 TAF15Q92804 592 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCM2-208ENST00000476594 MUL1Q969V5 352 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 RPEQ96AT9 228 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 DERL3Q96Q80 235 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 ANKRD60Q9BZ19 345 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 FKBP14Q9NWM8 211 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 IDI2-AS1Q9NZ38 188 aa8.26□□□□□ -1.09
CCM2-208ENST00000476594 GEMIN2O14893 280 aaKnown RBP8.25□□□□□ -1.09
CCM2-208ENST00000476594 RGS10O43665 173 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 MYF6P23409 242 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 RPS11P62280 158 aaKnown RBP eCLIP8.25□□□□□ -1.09
CCM2-208ENST00000476594 HERPUD1Q15011 391 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 RBM48Q5RL73 367 aaKnown RBP8.25□□□□□ -1.09
CCM2-208ENST00000476594 C6orf183Q5T699 404 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 RSBN1Q5VWQ0 802 aaPredicted RBP8.25□□□□□ -1.09
CCM2-208ENST00000476594 PHYHIPQ92561 330 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 TOMM40LQ969M1 308 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 KIRREL1Q96J84 757 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 CCDC90BQ9GZT6 254 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 MMP28Q9H239 520 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 PPIL3Q9H2H8 161 aaKnown RBP8.25□□□□□ -1.09
CCM2-208ENST00000476594 MMP27Q9H306 513 aa8.25□□□□□ -1.09
CCM2-208ENST00000476594 NKX1-2Q9UD57 310 aaPredicted RBP8.25□□□□□ -1.09
CCM2-208ENST00000476594 TRAV8-7A0A075B6U6 113 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 A0A1W2PPK0 400 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 A6NDX4 124 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 BUB1B-PAK6H3BSN5 160 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 M0QZK8 103 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 AIPO00170 330 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 SPINT2O43291 252 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 ORC5O43913 435 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 CRTAPO75718 401 aaPredicted RBP8.24□□□□□ -1.09
CCM2-208ENST00000476594 ARL6IP5O75915 188 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 IGLV1-47P01700 117 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 GLAP06280 429 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 IL3RAP26951 378 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 EFNB2P52799 333 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 SLC35A2P78381 396 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 MADCAM1Q13477 382 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 ACSM3Q53FZ2 586 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 HSD17B12Q53GQ0 312 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 LAIR2Q6ISS4 152 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 IZUMO2Q6UXV1 221 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 OR52M1Q8NGK5 317 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 OR13A1Q8NGR1 328 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 OR10X1Q8NGY0 326 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 MRGPRDQ8TDS7 321 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 ORAI1Q96D31 301 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 TMED9Q9BVK6 235 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 Q9H521 79 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 LIN7BQ9HAP6 207 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 ZNF286AQ9HBT8 521 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 ISYNA1Q9NPH2 558 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 TRAPPC2LQ9UL33 140 aa8.24□□□□□ -1.09
CCM2-208ENST00000476594 KIAA2026Q5HYC2 2103 aa8.23□□□□□ -1.09
CCM2-208ENST00000476594 FAM172BPA6NC97 362 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms