RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 OR8H3Q8N146 312 aa10.33□□□□□ -0.76
MRPL55-228ENST00000476267 OR10A7Q8NGE5 316 aa10.33□□□□□ -0.76
MRPL55-228ENST00000476267 OR51A2Q8NGJ7 313 aa10.33□□□□□ -0.76
MRPL55-228ENST00000476267 OR5D14Q8NGL3 314 aa10.33□□□□□ -0.76
MRPL55-228ENST00000476267 RGP1Q92546 391 aaPredicted RBP10.33□□□□□ -0.76
MRPL55-228ENST00000476267 PDCD1LG2Q9BQ51 273 aa10.33□□□□□ -0.76
MRPL55-228ENST00000476267 ALG8Q9BVK2 526 aa10.33□□□□□ -0.76
MRPL55-228ENST00000476267 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.33□□□□□ -0.76
MRPL55-228ENST00000476267 ZFP57Q9NU63 452 aa10.33□□□□□ -0.76
MRPL55-228ENST00000476267 LINC00527Q9UJ94 153 aa10.33□□□□□ -0.76
MRPL55-228ENST00000476267 HUWE1Q7Z6Z7 4374 aaKnown RBP10.33□□□□□ -0.76
MRPL55-228ENST00000476267 TMEM212A6NML5 194 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 EI24O14681 340 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 IGKV1D-33P01593 117 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 IGKV1-33P01594 117 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 CCDC159P0C7I6 412 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 VSIG8P0DPA2 414 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 C21orf33P30042 268 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-228ENST00000476267 KCNJ3P48549 501 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 ZSCAN26Q16670 478 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 PIGYQ3MUY2 71 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 STPG2Q8N412 459 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 COMMD1Q8N668 190 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 HAVCR2Q8TDQ0 301 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 MRGPRDQ8TDS7 321 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 WWC2-AS2Q96NR7 200 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 MCRIP2Q9BUT9 160 aaKnown RBP10.32□□□□□ -0.76
MRPL55-228ENST00000476267 BARHL1Q9BZE3 327 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 IFT22Q9H7X7 185 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 ERVK13-1Q9NX77 482 aa10.32□□□□□ -0.76
MRPL55-228ENST00000476267 TRAV39A0A0B4J263 110 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 SERPINE3A8MV23 424 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 H3BNX3 289 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 C15orf65H3BRN8 121 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 HSD17B6O14756 317 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 RPSAP08865 295 aaKnown RBP10.31□□□□□ -0.76
MRPL55-228ENST00000476267 GNG10P50151 68 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 ALDH3A2P51648 485 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 CD69Q07108 199 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 NHLRC3Q5JS37 347 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 LPCAT4Q643R3 524 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 SLC35E3Q7Z769 313 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 IZUMO1Q8IYV9 350 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 RNF152Q8N8N0 203 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 TMEM104Q8NE00 496 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 KLHL30-AS1Q8NEE0 82 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 OR10K1Q8NGX5 313 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 OR5AK2Q8NH90 309 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 RFESDQ8TAC1 157 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 PYDC1Q8WXC3 89 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 DPF1Q92782 380 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 ST6GALNAC6Q969X2 333 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 RAX2Q96IS3 184 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 NR1H4Q96RI1 486 aaPredicted RBP10.31□□□□□ -0.76
MRPL55-228ENST00000476267 DHDHQ9UQ10 334 aa10.31□□□□□ -0.76
MRPL55-228ENST00000476267 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 IGHV1-3A0A0C4DH29 117 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 A0A1W2PPE3 182 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 RASSF2P50749 326 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 CFHR3Q02985 330 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 MRPL28Q13084 256 aaKnown RBP10.3□□□□□ -0.76
MRPL55-228ENST00000476267 HES1Q14469 280 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 HNF4GQ14541 408 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 LTC4SQ16873 150 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 ZIK1Q3SY52 487 aaPredicted RBP10.3□□□□□ -0.76
MRPL55-228ENST00000476267 TGIF2LXQ8IUE1 241 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 ZNF695Q8IW36 515 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 LINC00311Q8N616 119 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 C8orf31Q8N9H6 132 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 Q8N9W7 124 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 SUMF2Q8NBJ7 301 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 TNFAIP8L1Q8WVP5 186 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 EAF1Q96JC9 268 aaPredicted RBP10.3□□□□□ -0.76
MRPL55-228ENST00000476267 DUX3Q96PT4 197 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 DPCDQ9BVM2 203 aaPredicted RBP10.3□□□□□ -0.76
MRPL55-228ENST00000476267 JAM3Q9BX67 310 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 ABCG5Q9H222 651 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 PLSCR3Q9NRY6 295 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 LIN7CQ9NUP9 197 aaKnown RBP10.3□□□□□ -0.76
MRPL55-228ENST00000476267 MRPS18AQ9NVS2 196 aaKnown RBP10.3□□□□□ -0.76
MRPL55-228ENST00000476267 IL36GQ9NZH8 169 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 LSM4Q9Y4Z0 139 aaKnown RBP10.3□□□□□ -0.76
MRPL55-228ENST00000476267 DNAH7Q8WXX0 4024 aa10.3□□□□□ -0.76
MRPL55-228ENST00000476267 SNTNA6NMZ2 147 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 ATP5HO75947 161 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 RPLP1P05386 114 aaKnown RBP10.29□□□□□ -0.76
MRPL55-228ENST00000476267 LIMS3P0CW19 117 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 LIMS4P0CW20 117 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 RAB3AP20336 220 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 GPR12P47775 334 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 GTF2A1P52655 376 aaPredicted RBP10.29□□□□□ -0.76
MRPL55-228ENST00000476267 RBM11P57052 281 aaKnown RBP10.29□□□□□ -0.76
MRPL55-228ENST00000476267 SLC35B1P78383 322 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 RAB40BQ12829 278 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 XAF1Q6GPH4 301 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 FAM53AQ6NSI3 398 aaPredicted RBP10.29□□□□□ -0.76
MRPL55-228ENST00000476267 FOXRED2Q8IWF2 684 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 OR52M1Q8NGK5 317 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 OR10X1Q8NGY0 326 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 RHOXF1Q8NHV9 184 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms