RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 DLK2Q6UY11 383 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 APOBEC3DQ96AK3 386 aaPredicted RBP10.2□□□□□ -0.78
U2AF1-209ENST00000475639 SPSB1Q96BD6 273 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 SMIM8Q96KF7 97 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 PBOV1Q9GZY1 135 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 LPAR5Q9H1C0 372 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 NAA60Q9H7X0 242 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 LHX9Q9NQ69 397 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 ELOA3CA0A087WX78 387 aaPredicted RBP10.2□□□□□ -0.78
U2AF1-209ENST00000475639 PRSS37A4D1T9 235 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 SOX15O60248 233 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 TBX6O95947 436 aaPredicted RBP10.2□□□□□ -0.78
U2AF1-209ENST00000475639 GNG3P63215 75 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 FBXL14Q8N1E6 418 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 ADPRHL1Q8NDY3 354 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 OR10G8Q8NGN5 311 aa10.2□□□□□ -0.78
U2AF1-209ENST00000475639 LPAR6P43657 344 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 PKIAP61925 76 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 HTRA3P83110 453 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 IGFBP7Q16270 282 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 RPEL1Q2QD12 228 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 HLA-DRB5Q30154 266 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 FAM78BQ5VT40 261 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 TMEM229BQ8NBD8 167 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 FAM131CQ96AQ9 280 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 WDR34Q96EX3 536 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 TMEM167BQ9NRX6 74 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 C20orf141Q9NUB4 165 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 TMEM238LA0A1B0GVL6 79 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 A6NJY4 79 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 BIVMQ86UB2 503 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 OR1N2Q8NGR9 330 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 KIR3DX1Q9H7L2 352 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 SIT1Q9Y3P8 196 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 TMPRSS11DO60235 418 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 TIMP1P01033 207 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 OR4A8P0C604 315 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 EFNB2P52799 333 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 SLC37A2Q8TED4 501 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 MED29Q9NX70 200 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 ZDHHC8Q9ULC8 765 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 AMDHD2Q9Y303 409 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 HDGFL3Q9Y3E1 203 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 IGHV3-20A0A0C4DH32 117 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 STAG3L3P0CL85 134 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 CEACAM3P40198 252 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 RPS27P42677 84 aaKnown RBP10.19□□□□□ -0.78
U2AF1-209ENST00000475639 KCNAB1Q14722 419 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 ANKRD33Q7Z3H0 272 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 LYG1Q8N1E2 194 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 OR5C1Q8NGR4 320 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 OR1N1Q8NGS0 311 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 MYOZ3Q8TDC0 251 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 SH2D2AQ9NP31 389 aa10.19□□□□□ -0.78
U2AF1-209ENST00000475639 RPS4Y1P22090 263 aaKnown RBP10.18□□□□□ -0.78
U2AF1-209ENST00000475639 COL8A1P27658 744 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 UBE2L3P68036 154 aaKnown RBP10.18□□□□□ -0.78
U2AF1-209ENST00000475639 NKAIN2Q5VXU1 208 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 C6orf15Q6UXA7 325 aaPredicted RBP10.18□□□□□ -0.78
U2AF1-209ENST00000475639 C1QL4Q86Z23 238 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 ZDHHC22Q8N966 263 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 OR5AU1Q8NGC0 362 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 MRGPRX4Q96LA9 322 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 S1PR5Q9H228 398 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 MDC1Q14676 2089 aaKnown RBP10.18□□□□□ -0.78
U2AF1-209ENST00000475639 ZNF737O75373 536 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 NGFP01138 241 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 PAX1P15863 534 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 NUTF2P61970 127 aaKnown RBP10.18□□□□□ -0.78
U2AF1-209ENST00000475639 DUSP8Q13202 625 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 SP6Q3SY56 376 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 DPPA3Q6W0C5 159 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 LIAT1Q6ZQX7 453 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 OR2D2Q9H210 308 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 SLC25A22Q9H936 323 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 GPANK1O95872 356 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 THBS4P35443 961 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 ID4P47928 161 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 CLLU1OSQ5K130 101 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 OR2C3Q8N628 320 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 OR10A7Q8NGE5 316 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 VSTM2AQ8TAG5 236 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 ADAMTS17Q8TE56 1095 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 RAB37Q96AX2 223 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 GPR87Q9BY21 358 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 MARCH5Q9NX47 278 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 RAB29O14966 203 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 RHBDL1O75783 438 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 HLA-GP17693 338 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 FPR2P25090 351 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 CD27P26842 260 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 NANOS3P60323 173 aaKnown RBP10.18□□□□□ -0.78
U2AF1-209ENST00000475639 TCTN1Q2MV58 587 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 MTURNQ8N3F0 131 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 WFDC5Q8TCV5 224 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 ASB16Q96NS5 453 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 MYOZ1Q9NP98 299 aaPredicted RBP10.18□□□□□ -0.78
U2AF1-209ENST00000475639 DOK5Q9P104 306 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 HSPB8Q9UJY1 196 aa10.18□□□□□ -0.78
U2AF1-209ENST00000475639 LMX1BO60663 402 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms