RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 ATXN7L3Q14CW9 347 aaPredicted RBP7.9□□□□□ -1.14
DDX39B-217ENST00000474961 RNASE12Q5GAN4 147 aaKnown RBP7.9□□□□□ -1.14
DDX39B-217ENST00000474961 SHEQ5VZ18 495 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 CDPF1Q6NVV7 123 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 OR8H2Q8N162 312 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 FGFRL1Q8N441 504 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 OR5D13Q8NGL4 314 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 OR52I2Q8NH67 350 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 NUDCD2Q8WVJ2 157 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 NEIL1Q96FI4 390 aaPredicted RBP7.9□□□□□ -1.14
DDX39B-217ENST00000474961 SDHCQ99643 169 aaPredicted RBP7.9□□□□□ -1.14
DDX39B-217ENST00000474961 CMSS1Q9BQ75 279 aaKnown RBP7.9□□□□□ -1.14
DDX39B-217ENST00000474961 HDHD3Q9BSH5 251 aaPredicted RBP7.9□□□□□ -1.14
DDX39B-217ENST00000474961 SRRQ9GZT4 340 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 FAM234AQ9H0X4 552 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 PATZ1Q9HBE1 687 aaKnown RBP7.9□□□□□ -1.14
DDX39B-217ENST00000474961 ING3Q9NXR8 418 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 PCDHB10Q9UN67 800 aa7.9□□□□□ -1.14
DDX39B-217ENST00000474961 MALRD1Q5VYJ5 2156 aa7.9□□□□□ -1.15
DDX39B-217ENST00000474961 MEIS3P1A6NDR6 274 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 F5H0A9 414 aaPredicted RBP7.89□□□□□ -1.15
DDX39B-217ENST00000474961 GABARAPH6UMI1 98 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 J3QRK9 145 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 SULT1C2O00338 296 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 DVL1O14640 695 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 GSTZ1O43708 216 aaPredicted RBP7.89□□□□□ -1.15
DDX39B-217ENST00000474961 NAPSAO96009 420 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 MT-ND4P03905 459 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 CSN2P05814 226 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 NDUFB7P17568 137 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 GLIPR1P48060 266 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 PPP5CP53041 499 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 MRPS10P82664 201 aaKnown RBP7.89□□□□□ -1.15
DDX39B-217ENST00000474961 MRPS15P82914 257 aaKnown RBP7.89□□□□□ -1.15
DDX39B-217ENST00000474961 AESQ08117 197 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 EDDM3AQ14507 147 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 LRRC10Q5BKY1 277 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 RSBN1Q5VWQ0 802 aaPredicted RBP7.89□□□□□ -1.15
DDX39B-217ENST00000474961 SLC35E4Q6ICL7 350 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 ZNF841Q6ZN19 808 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 ZNF497Q6ZNH5 498 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 GDPD3Q7L5L3 318 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 NLRC3Q7RTR2 1065 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 TRAPPC6BQ86SZ2 158 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 Q8N402 240 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 GDPD1Q8N9F7 314 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 OR8B3Q8NGG8 313 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 CLDND2Q8NHS1 167 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 GPX8Q8TED1 209 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 FCAMRQ8WWV6 532 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 COQ2Q96H96 371 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 OR8B2Q96RD0 313 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 RIMS4Q9H426 269 aaPredicted RBP7.89□□□□□ -1.15
DDX39B-217ENST00000474961 SCPEP1Q9HB40 452 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 SLC25A10Q9UBX3 287 aaPredicted RBP7.89□□□□□ -1.15
DDX39B-217ENST00000474961 ITPR2Q14571 2701 aa7.89□□□□□ -1.15
DDX39B-217ENST00000474961 PDZD2O15018 2839 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 NBPF19A0A087WUL8 3843 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 TMEM30CPA0ZSE6 113 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 H7C1Q1 480 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 LANCL1O43813 399 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 IGHV2-5P01817 119 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 LPLP06858 475 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 SLC25A16P16260 332 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 DTYMKP23919 212 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 CD40LGP29965 261 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 ERP29P30040 261 aaKnown RBP7.88□□□□□ -1.15
DDX39B-217ENST00000474961 CBX5P45973 191 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 P2RX3P56373 397 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 SEC61A1P61619 476 aaKnown RBP7.88□□□□□ -1.15
DDX39B-217ENST00000474961 LMO4P61968 165 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 PAX5Q02548 391 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 Q5PR19 223 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 WDR25Q64LD2 544 aaPredicted RBP7.88□□□□□ -1.15
DDX39B-217ENST00000474961 PRSS57Q6UWY2 283 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 KRTAP1-3Q8IUG1 177 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 GAPTQ8N292 157 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 TPRX1Q8N7U7 411 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 OR4K15Q8NH41 348 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 SETD6Q8TBK2 473 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 MRPL30Q8TCC3 161 aaKnown RBP7.88□□□□□ -1.15
DDX39B-217ENST00000474961 CCDC107Q8WV48 283 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 SMIM4Q8WVI0 70 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 WDR89Q96FK6 387 aaPredicted RBP7.88□□□□□ -1.15
DDX39B-217ENST00000474961 THAP7Q9BT49 309 aaPredicted RBP7.88□□□□□ -1.15
DDX39B-217ENST00000474961 CHMP1AQ9HD42 196 aaPredicted RBP7.88□□□□□ -1.15
DDX39B-217ENST00000474961 C12orf4Q9NQ89 552 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 ZNF230Q9UIE0 474 aaPredicted RBP7.88□□□□□ -1.15
DDX39B-217ENST00000474961 KIF25Q9UIL4 384 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 PRRC2AP48634 2157 aaKnown RBP7.88□□□□□ -1.15
DDX39B-217ENST00000474961 CR1P17927 2039 aa7.88□□□□□ -1.15
DDX39B-217ENST00000474961 MEIKINA0A087WXM9 373 aa7.87□□□□□ -1.15
DDX39B-217ENST00000474961 TRBV6-6A0A0A6YYG2 114 aa7.87□□□□□ -1.15
DDX39B-217ENST00000474961 TRAV39A0A0B4J263 110 aa7.87□□□□□ -1.15
DDX39B-217ENST00000474961 IGHV4-61A0A0C4DH41 118 aa7.87□□□□□ -1.15
DDX39B-217ENST00000474961 ODAMA1E959 279 aa7.87□□□□□ -1.15
DDX39B-217ENST00000474961 FUOMA2VDF0 154 aa7.87□□□□□ -1.15
DDX39B-217ENST00000474961 RBBP9O75884 186 aa7.87□□□□□ -1.15
DDX39B-217ENST00000474961 FCER2P06734 321 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms