RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TMEM127O75204 238 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 TSPAN15O95858 294 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 ZNF728P0DKX0 622 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 VSIG10L2P0DP72 767 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 CD37P11049 281 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 SRMP19623 302 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 PAX6P26367 422 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 OR3A1P47881 315 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 PSMD7P51665 324 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 MEF2CQ06413 473 aaPredicted RBP12.28□□□□□ -0.44
VARS-223ENST00000474643 ZNF273Q14593 569 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 IL13RA2Q14627 380 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 AANATQ16613 207 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 PIGYQ3MUY2 71 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 PAN3Q58A45 887 aaKnown RBP12.28□□□□□ -0.44
VARS-223ENST00000474643 GLT8D1Q68CQ7 371 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 GLIPR1L1Q6UWM5 242 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 ZNF714Q96N38 554 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 MEGF9Q9H1U4 602 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 RANBP3Q9H6Z4 567 aaPredicted RBP12.28□□□□□ -0.44
VARS-223ENST00000474643 FBLN5Q9UBX5 448 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 PITPNC1Q9UKF7 332 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 ST3GAL6Q9Y274 331 aa12.28□□□□□ -0.44
VARS-223ENST00000474643 A0A0G2JK05 382 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 F2RL2O00254 374 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 SLC33A1O00400 549 aaPredicted RBP12.27□□□□□ -0.45
VARS-223ENST00000474643 OR7C1O76099 320 aaPredicted RBP12.27□□□□□ -0.45
VARS-223ENST00000474643 GTF2F2P13984 249 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 ATXN7L3Q14CW9 347 aaPredicted RBP12.27□□□□□ -0.45
VARS-223ENST00000474643 HERPUD1Q15011 391 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 KRBOX4Q5JUW0 171 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 HCP5Q6MZN7 132 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 Q6P435 159 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 ASCL4Q6XD76 172 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 TPRA1Q86W33 373 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 KLHDC1Q8N7A1 406 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 C11orf44Q8N8P7 122 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 OR51T1Q8NGJ9 327 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 NDNFQ8TB73 568 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 IL36GQ9NZH8 169 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 NDUFA13Q9P0J0 144 aa12.27□□□□□ -0.45
VARS-223ENST00000474643 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.45
VARS-223ENST00000474643 TRGV10A0A0A0MS01 117 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 AIREO43918 545 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 CRTAPO75718 401 aaPredicted RBP12.26□□□□□ -0.45
VARS-223ENST00000474643 GABARAPO95166 117 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 LMO1P25800 156 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 TMBIM6P55061 237 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 P2RX3P56373 397 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 RBM11P57052 281 aaKnown RBP12.26□□□□□ -0.45
VARS-223ENST00000474643 AESQ08117 197 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 SSX2Q16385 188 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 ATAD3CQ5T2N8 411 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 NEK7Q8TDX7 302 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 CAPSLQ8WWF8 208 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 KCTD7Q96MP8 289 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 UQCC2Q9BRT2 126 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 FUNDC2Q9BWH2 189 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 TXNL4BQ9NX01 149 aaKnown RBP12.26□□□□□ -0.45
VARS-223ENST00000474643 SIGLEC9Q9Y336 463 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 LINC00312Q9Y6C7 94 aa12.26□□□□□ -0.45
VARS-223ENST00000474643 A0A1W2PP11 408 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 ZNF701M0R085 212 aaPredicted RBP12.25□□□□□ -0.45
VARS-223ENST00000474643 PDCD5O14737 125 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 GEMIN2O14893 280 aaKnown RBP12.25□□□□□ -0.45
VARS-223ENST00000474643 RBP4P02753 201 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 GADD45AP24522 165 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 CALRP27797 417 aaKnown RBP12.25□□□□□ -0.45
VARS-223ENST00000474643 ERP29P30040 261 aaKnown RBP12.25□□□□□ -0.45
VARS-223ENST00000474643 KIR2DS4P43632 304 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 LINC00596Q86U02 117 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 OR4D6Q8NGJ1 314 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 RAB2BQ8WUD1 216 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 BARHL1Q9BZE3 327 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 SELENOIQ9C0D9 397 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 CST11Q9H112 138 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 GAL3ST2Q9H3Q3 398 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 BANF2Q9H503 90 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 PLGRKTQ9HBL7 147 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 CMYA5Q8N3K9 4069 aa12.25□□□□□ -0.45
VARS-223ENST00000474643 SMIM31A0A1B0GVY4 71 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 UBBP0CG47 229 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 IGHV1-8P0DP01 117 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 MYL9P24844 172 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 GLIPR1P48060 266 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 ARHGDIBP52566 201 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 MPV17LQ2QL34 196 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 NHLRC3Q5JS37 347 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 TET2Q6N021 2002 aaPredicted RBP12.24□□□□□ -0.45
VARS-223ENST00000474643 LRRTM1Q86UE6 522 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 Q8NFD4 153 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 MALSU1Q96EH3 234 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 OR51E2Q9H255 320 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 PPIL3Q9H2H8 161 aaKnown RBP12.24□□□□□ -0.45
VARS-223ENST00000474643 GHRLQ9UBU3 117 aa12.24□□□□□ -0.45
VARS-223ENST00000474643 UBE2J1Q9Y385 318 aaPredicted RBP12.24□□□□□ -0.45
VARS-223ENST00000474643 MEIKINA0A087WXM9 373 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms