RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 TRAT1Q6PIZ9 186 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 PRSS57Q6UWY2 283 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 ZNF497Q6ZNH5 498 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 GDPD1Q8N9F7 314 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 OR4K15Q8NH41 348 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 OR52I2Q8NH67 350 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 MRPL30Q8TCC3 161 aaKnown RBP6.92□□□□□ -1.3
CNN3-205ENST00000474409 CCDC107Q8WV48 283 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 SMIM4Q8WVI0 70 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 FCAMRQ8WWV6 532 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 MAFIPQ8WZ33 124 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 FOXC2Q99958 501 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 CCDC32Q9BV29 185 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 SHARPINQ9H0F6 387 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 ZNF286AQ9HBT8 521 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 LPAR3Q9UBY5 353 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 TACC2O95359 2948 aa6.92□□□□□ -1.3
CNN3-205ENST00000474409 ABCA1O95477 2261 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 TRGV10A0A0A0MS01 117 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 TRBV23-1A0A0A0MS06 115 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 KIR2DS1A0A191URI9 304 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 hADV38S2A0JD32 116 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 MEX3AA1L020 520 aaKnown RBP6.91□□□□□ -1.3
CNN3-205ENST00000474409 J3QRK9 145 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 GPR37O15354 613 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 PHF1O43189 567 aaPredicted RBP6.91□□□□□ -1.3
CNN3-205ENST00000474409 GSTZ1O43708 216 aaPredicted RBP6.91□□□□□ -1.3
CNN3-205ENST00000474409 SSX5O60225 188 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 FOXH1O75593 365 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 RBBP9O75884 186 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 NAPSAO96009 420 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 MELTFP08582 738 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 ERP29P30040 261 aaKnown RBP6.91□□□□□ -1.3
CNN3-205ENST00000474409 IL2RGP31785 369 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 RCVRNP35243 200 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 KIR2DS4P43632 304 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 GLIPR1P48060 266 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 PPP5CP53041 499 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 ARPC4P59998 168 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 RPL31P62899 125 aaKnown RBP6.91□□□□□ -1.3
CNN3-205ENST00000474409 HLA-DRB3P79483 266 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 PAX5Q02548 391 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 KIR2DS1Q14954 304 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 ZNF57Q68EA5 555 aaPredicted RBP6.91□□□□□ -1.3
CNN3-205ENST00000474409 BTN2A1Q7KYR7 527 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 KRTAP1-3Q8IUG1 177 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 PRR18Q8N4B5 295 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 MRGPRDQ8TDS7 321 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 GPX8Q8TED1 209 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 SOSTQ9BQB4 213 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 DCTN5Q9BTE1 182 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 ST6GALNAC5Q9BVH7 336 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 GAL3ST2Q9H3Q3 398 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 C19orf12Q9NSK7 152 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 KCNIP1Q9NZI2 227 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 OR6C3Q9NZP0 311 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 ZNF230Q9UIE0 474 aaPredicted RBP6.91□□□□□ -1.3
CNN3-205ENST00000474409 ITGB1BP2Q9UKP3 347 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 MGAT4AQ9UM21 535 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 VPS13CQ709C8 3753 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 ITPR2Q14571 2701 aa6.91□□□□□ -1.3
CNN3-205ENST00000474409 CCDC168Q8NDH2 2452 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 TRBV6-6A0A0A6YYG2 114 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 TRAV39A0A0B4J263 110 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 A0A1W2PPH5 198 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 A8MXK9 166 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 FCN3O75636 299 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 ECDO95905 644 aaPredicted RBP6.9□□□□□ -1.3
CNN3-205ENST00000474409 MT-ND4P03905 459 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 INHBBP09529 407 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 CSF1P09603 554 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 SSTR5P35346 364 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 GDNFP39905 211 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 TAS2R19P59542 299 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 LMO4P61968 165 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 LCN2P80188 198 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 SSBP1Q04837 148 aaKnown RBP6.9□□□□□ -1.3
CNN3-205ENST00000474409 MEF2CQ06413 473 aaPredicted RBP6.9□□□□□ -1.3
CNN3-205ENST00000474409 CHRFAM7AQ494W8 412 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 CD276Q5ZPR3 534 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 OR52W1Q6IF63 320 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 C16orf87Q6PH81 154 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 ZNF841Q6ZN19 808 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 GAPTQ8N292 157 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 GVQW1Q8N7I0 195 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 WFDC11Q8NEX6 87 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 BEST4Q8NFU0 473 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 OR13A1Q8NGR1 328 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 BORCS5Q969J3 196 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 TRIM63Q969Q1 353 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 ZNF714Q96N38 554 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 THAP7Q9BT49 309 aaPredicted RBP6.9□□□□□ -1.3
CNN3-205ENST00000474409 LPAR2Q9HBW0 351 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 Q9N2K0 584 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 RAB9BQ9NP90 201 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 ABCB10Q9NRK6 738 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 TAS2R8Q9NYW2 309 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 KLK11Q9UBX7 282 aa6.9□□□□□ -1.3
CNN3-205ENST00000474409 MTFP1Q9UDX5 166 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms