RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 TRAM1Q15629 374 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 ACSM3Q53FZ2 586 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 RBM48Q5RL73 367 aaKnown RBP10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 PRAMEF5Q5TYX0 476 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 RSBN1Q5VWQ0 802 aaPredicted RBP10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 AWAT2Q6E213 333 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 Q6ZSV7 163 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 PRSS48Q7RTY5 328 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 LYPD6Q86Y78 171 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 SUMF2Q8NBJ7 301 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 LINC01006Q8NI28 216 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 PHYHIPQ92561 330 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 UFD1Q92890 307 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 MUL1Q969V5 352 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 CREB3L1Q96BA8 519 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 DPCDQ9BVM2 203 aaPredicted RBP10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 PPIL3Q9H2H8 161 aaKnown RBP10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 RANBP3Q9H6Z4 567 aaPredicted RBP10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 LINC00574Q9H8X3 128 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 SPACA1Q9HBV2 294 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 TCF7L1Q9HCS4 588 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 ABCB10Q9NRK6 738 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 GHRLQ9UBU3 117 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 KIF25Q9UIL4 384 aa10.47□□□□□ -0.73
SHROOM3-204ENST00000473602 H3BUI4 141 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 GEMIN2O14893 280 aaKnown RBP10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 CGB3P0DN86 165 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 CGB7P0DN87 165 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 PSMA1P25786 263 aaKnown RBP10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 GLP1RP43220 463 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 FAM189A2Q15884 450 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 SSX2Q16385 188 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 C17orf58Q2M2W7 97 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 SLC35E4Q6ICL7 350 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 GLIPR1L1Q6UWM5 242 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 ABHD12Q8N2K0 398 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 OR10A7Q8NGE5 316 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 OR4P4Q8NGL7 312 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 NDNFQ8TB73 568 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 PIFOQ8TCI5 191 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 SGCDQ92629 289 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 TMED9Q9BVK6 235 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 ING3Q9NXR8 418 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 CALYQ9NYX4 217 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 PITPNC1Q9UKF7 332 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 TCF19Q9Y242 345 aa10.46□□□□□ -0.73
SHROOM3-204ENST00000473602 FAM90A10PA6NDY2 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A18PA6NE21 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A16PA6NEW6 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A20PA6NIJ5 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A7PA6NKC0 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A22PA8MWA6 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A12PA8MX19 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A5PA8MXJ8 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A23PA8MXZ1 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 IL1AP01583 271 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 IGLV1-47P01700 117 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A15PP0C7V4 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A13PP0C7W8 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A14PP0C7W9 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM90A24PP0C7X0 464 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 UBBP0CG47 229 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 CEACAM3P40198 252 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 VHLP40337 213 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 ARHGDIBP52566 201 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 PRRX1P54821 245 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 PROK1P58294 105 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 MLLT11Q13015 90 aaPredicted RBP10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 TPBGQ13641 420 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 RBM39Q14498 530 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 TBCEQ15813 527 aaPredicted RBP10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 LY6EQ16553 131 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 HSD17B12Q53GQ0 312 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 LDLRAD2Q5SZI1 272 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 C11orf88Q6PI97 169 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 DYNAPQ8N1N2 210 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 OR4C13Q8NGP0 309 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 OR13A1Q8NGR1 328 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 PLPPR1Q8TBJ4 325 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 KIRREL1Q96J84 757 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 CNBD2Q96M20 576 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 NPFFR1Q9GZQ6 430 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 CCDC90BQ9GZT6 254 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 CST11Q9H112 138 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 RCC2Q9P258 522 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 DPM3Q9P2X0 92 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 FBLN5Q9UBX5 448 aa10.45□□□□□ -0.74
SHROOM3-204ENST00000473602 A0A1W2PP11 408 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 TMEM30CPA0ZSE6 113 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 LEUTXA8MZ59 168 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 NPIPB11E5RHQ5 1161 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 TOR1AO14656 332 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 UCHL1P09936 223 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 MGMTP16455 207 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 CPEP16870 476 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 GZMHP20718 246 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 PAX6P26367 422 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 GDNFP39905 211 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 HLA-DRB5Q30154 266 aa10.44□□□□□ -0.74
SHROOM3-204ENST00000473602 ATAD3CQ5T2N8 411 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms