RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 ARHGDIBP52566 201 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 IRF3Q14653 427 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 ACSM3Q53FZ2 586 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 PLA1AQ53H76 456 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 GLIPR1L1Q6UWM5 242 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 OR10A7Q8NGE5 316 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 OR4P4Q8NGL7 312 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 MUL1Q969V5 352 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 OR5M11Q96RB7 305 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 UQCC2Q9BRT2 126 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 LINC00574Q9H8X3 128 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 SPACA1Q9HBV2 294 aa13.76□□□□□ -0.21
COMMD3-210ENST00000472610 LSM2Q9Y333 95 aaKnown RBP13.76□□□□□ -0.21
COMMD3-210ENST00000472610 RGS10O43665 173 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 GZMHP20718 246 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 GDNFP39905 211 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 RAB13P51153 203 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 SRSF4Q08170 494 aaKnown RBP13.75□□□□□ -0.21
COMMD3-210ENST00000472610 ATAD3CQ5T2N8 411 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 AWAT2Q6E213 333 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 IZUMO2Q6UXV1 221 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 OR13A1Q8NGR1 328 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 OR2T6Q8NHC8 308 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 PLPPR1Q8TBJ4 325 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 ZNF286AQ9HBT8 521 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 TCF7L1Q9HCS4 588 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 CALYQ9NYX4 217 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 IDI2-AS1Q9NZ38 188 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 GHRLQ9UBU3 117 aa13.75□□□□□ -0.21
COMMD3-210ENST00000472610 A0A1W2PP11 408 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 A6NDX4 124 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 NPIPB11E5RHQ5 1161 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 F2RL2O00254 374 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 IL1AP01583 271 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 NFYBP25208 207 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 BRS3P32247 399 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 RBM39Q14498 530 aaKnown RBP13.74□□□□□ -0.21
COMMD3-210ENST00000472610 HLA-DRB5Q30154 266 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 BAIAP2L2Q6UXY1 529 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 SLC16A12Q6ZSM3 486 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 LYPD6Q86Y78 171 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 OR9G1Q8NH87 305 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 PHYHIPQ92561 330 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 KIRREL1Q96J84 757 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 TMED9Q9BVK6 235 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 ISYNA1Q9NPH2 558 aa13.74□□□□□ -0.21
COMMD3-210ENST00000472610 TMEM30CPA0ZSE6 113 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A10PA6NDY2 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A18PA6NE21 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A16PA6NEW6 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A20PA6NIJ5 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A7PA6NKC0 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A22PA8MWA6 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A12PA8MX19 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A5PA8MXJ8 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A23PA8MXZ1 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 OOSP1A8MZH6 123 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 MCRIP1C9JLW8 97 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 BUB1B-PAK6H3BSN5 160 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 M0QZ24 198 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 CHST1O43916 411 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A15PP0C7V4 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A13PP0C7W8 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A14PP0C7W9 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM90A24PP0C7X0 464 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 CRHBPP24387 322 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 KRTAP10-3P60369 221 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 CCBE1Q6UXH8 406 aaPredicted RBP13.73□□□□□ -0.21
COMMD3-210ENST00000472610 PRSS48Q7RTY5 328 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 MRGPRDQ8TDS7 321 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 NEK7Q8TDX7 302 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 SGCDQ92629 289 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 UFD1Q92890 307 aa13.73□□□□□ -0.21
COMMD3-210ENST00000472610 AMMECR1Q9Y4X0 333 aaPredicted RBP13.73□□□□□ -0.21
COMMD3-210ENST00000472610 FAM172BPA6NC97 362 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 UBBP0CG47 229 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 MGMTP16455 207 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 SRMP19623 302 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 EFNB2P52799 333 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 TPBGQ13641 420 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 TRAM1Q15629 374 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 RBM48Q5RL73 367 aaKnown RBP13.72□□□□□ -0.21
COMMD3-210ENST00000472610 GLT8D1Q68CQ7 371 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 CCDC144NLQ6NUI1 221 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 TREML4Q6UXN2 200 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 CEACAM19Q7Z692 300 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 CCDC90BQ9GZT6 254 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 ZNF581Q9P0T4 197 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 RCC2Q9P258 522 aaKnown RBP13.72□□□□□ -0.21
COMMD3-210ENST00000472610 BLOC1S6Q9UL45 172 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 RAB26Q9ULW5 256 aa13.72□□□□□ -0.21
COMMD3-210ENST00000472610 J3QR06 171 aa13.71□□□□□ -0.21
COMMD3-210ENST00000472610 CRTAPO75718 401 aaPredicted RBP13.71□□□□□ -0.21
COMMD3-210ENST00000472610 SC5DO75845 299 aa13.71□□□□□ -0.21
COMMD3-210ENST00000472610 GLAP06280 429 aa13.71□□□□□ -0.21
COMMD3-210ENST00000472610 MNDAP41218 407 aa13.71□□□□□ -0.21
COMMD3-210ENST00000472610 INSL4Q14641 139 aa13.71□□□□□ -0.21
COMMD3-210ENST00000472610 HSD17B12Q53GQ0 312 aa13.71□□□□□ -0.21
COMMD3-210ENST00000472610 TPTE2P1Q5T6R2 138 aa13.71□□□□□ -0.21
COMMD3-210ENST00000472610 LIPKQ5VXJ0 399 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms