RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ST6GALNAC5Q9BVH7 336 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 C19orf12Q9NSK7 152 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 ITGB1BP2Q9UKP3 347 aa15.89■□□□□ 0.13
PSPC1-203ENST00000471658 RNF223E7ERA6 249 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 GABARAPH6UMI1 98 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 GNB2P62879 340 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 MRPS15P82914 257 aaKnown RBP15.88■□□□□ 0.13
PSPC1-203ENST00000471658 BTN2A1Q7KYR7 527 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 MAPK1IP1LQ8NDC0 245 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 SMIM4Q8WVI0 70 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 FCAMRQ8WWV6 532 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 C12orf4Q9NQ89 552 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 RABL2AQ9UBK7 228 aaPredicted RBP15.88■□□□□ 0.13
PSPC1-203ENST00000471658 TRAPPC2LQ9UL33 140 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 RABL2BQ9UNT1 228 aa15.88■□□□□ 0.13
PSPC1-203ENST00000471658 IGKV1D-8A0A087WSZ0 117 aa15.87■□□□□ 0.13
PSPC1-203ENST00000471658 ODAMA1E959 279 aa15.87■□□□□ 0.13
PSPC1-203ENST00000471658 FAM157AC9JC47 383 aa15.87■□□□□ 0.13
PSPC1-203ENST00000471658 GSTZ1O43708 216 aaPredicted RBP15.87■□□□□ 0.13
PSPC1-203ENST00000471658 LPLP06858 475 aa15.87■□□□□ 0.13
PSPC1-203ENST00000471658 USF1P22415 310 aaPredicted RBP15.87■□□□□ 0.13
PSPC1-203ENST00000471658 ERP29P30040 261 aaKnown RBP15.87■□□□□ 0.13
PSPC1-203ENST00000471658 PPP5CP53041 499 aa15.87■□□□□ 0.13
PSPC1-203ENST00000471658 OR13A1Q8NGR1 328 aa15.87■□□□□ 0.13
PSPC1-203ENST00000471658 UBALD1Q8TB05 177 aa15.87■□□□□ 0.13
PSPC1-203ENST00000471658 C15orf40Q8WUR7 153 aa15.87■□□□□ 0.13
PSPC1-203ENST00000471658 OCSTAMPQ9BR26 566 aa15.87■□□□□ 0.13
PSPC1-203ENST00000471658 THAP7Q9BT49 309 aaPredicted RBP15.87■□□□□ 0.13
PSPC1-203ENST00000471658 SSBP3Q9BWW4 388 aaPredicted RBP15.87■□□□□ 0.13
PSPC1-203ENST00000471658 WDR12Q9GZL7 423 aaKnown RBP15.87■□□□□ 0.13
PSPC1-203ENST00000471658 SULT1C2O00338 296 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 ORC5O43913 435 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 PAX5Q02548 391 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 ESCO2Q56NI9 601 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 ZNF880Q6PDB4 577 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 TCF23Q7RTU1 214 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 GDPD1Q8N9F7 314 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 MRGPRDQ8TDS7 321 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 REG4Q9BYZ8 158 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 SCPEP1Q9HB40 452 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 Q9N2K0 584 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 MALRD1Q5VYJ5 2156 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 FLNBO75369 2602 aaKnown RBP15.86■□□□□ 0.13
PSPC1-203ENST00000471658 TRBV6-6A0A0A6YYG2 114 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 KIAA1324LA8MWY0 1029 aaPredicted RBP15.86■□□□□ 0.13
PSPC1-203ENST00000471658 C22orf46C9J442 243 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 RPL31P62899 125 aaKnown RBP15.86■□□□□ 0.13
PSPC1-203ENST00000471658 LCN2P80188 198 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 MRPS10P82664 201 aaKnown RBP15.86■□□□□ 0.13
PSPC1-203ENST00000471658 TMEM200BQ69YZ2 307 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 OR52W1Q6IF63 320 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 FAM185AQ8N0U4 392 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 RIMS4Q9H426 269 aaPredicted RBP15.86■□□□□ 0.13
PSPC1-203ENST00000471658 MTFP1Q9UDX5 166 aa15.86■□□□□ 0.13
PSPC1-203ENST00000471658 RBBP9O75884 186 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 DTYMKP23919 212 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 CD40LGP29965 261 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 GLP1RP43220 463 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 NPY4RP50391 375 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 ZNF273Q14593 569 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 HOGA1Q86XE5 327 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 SNAPC3Q92966 411 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 TRIM63Q969Q1 353 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 RAB39BQ96DA2 213 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 LPAR2Q9HBW0 351 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 IFT46Q9NQC8 304 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 ANAPC10Q9UM13 185 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 RBMX2Q9Y388 322 aaKnown RBP15.85■□□□□ 0.13
PSPC1-203ENST00000471658 AKAP9Q99996 3911 aa15.85■□□□□ 0.13
PSPC1-203ENST00000471658 CCDC168Q8NDH2 2452 aa15.84■□□□□ 0.13
PSPC1-203ENST00000471658 MED13LQ71F56 2210 aa15.84■□□□□ 0.13
PSPC1-203ENST00000471658 ARHGAP32A7KAX9 2087 aa15.84■□□□□ 0.13
PSPC1-203ENST00000471658 GDNFP39905 211 aa15.84■□□□□ 0.13
PSPC1-203ENST00000471658 ERVFRD-1P60508 538 aa15.84■□□□□ 0.13
PSPC1-203ENST00000471658 LYSMD2Q8IV50 215 aa15.84■□□□□ 0.13
PSPC1-203ENST00000471658 MBNL3Q9NUK0 354 aaKnown RBP15.84■□□□□ 0.13
PSPC1-203ENST00000471658 RPUSD1Q9UJJ7 312 aaKnown RBP15.84■□□□□ 0.13
PSPC1-203ENST00000471658 KIAA2026Q5HYC2 2103 aa15.84■□□□□ 0.13
PSPC1-203ENST00000471658 LOC105371242A0A075B767 164 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 FUOMA2VDF0 154 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 H7C1Q1 480 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 SCTP09683 121 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 IL7P13232 177 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 CCL3L1P16619 93 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 CBX5P45973 191 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 BEST4Q8NFU0 473 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 RFESDQ8TAC1 157 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 NCOR1P1Q9H4R4 102 aa15.83■□□□□ 0.13
PSPC1-203ENST00000471658 C12orf77C9JDV5 145 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 GPR37O15354 613 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 GSTT2P0CG29 244 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 GSTT2BP0CG30 244 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 CGB3P0DN86 165 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 CGB7P0DN87 165 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 HLA-DMAP28067 261 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 SSTR5P35346 364 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 IFITM3Q01628 133 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 MEF2CQ06413 473 aaPredicted RBP15.83■□□□□ 0.12
PSPC1-203ENST00000471658 LOXL1Q08397 574 aaPredicted RBP15.83■□□□□ 0.12
PSPC1-203ENST00000471658 PRR18Q8N4B5 295 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms