RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 FAM220AQ7Z4H9 259 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 NR2C2APQ86WQ0 139 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 CALHM1Q8IU99 346 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 WFDC12Q8WWY7 111 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 TAF15Q92804 592 aaKnown RBP eCLIP11.04□□□□□ -0.64
HMGN1-211ENST00000471260 THAP7Q9BT49 309 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-211ENST00000471260 RANGRFQ9HD47 186 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-211ENST00000471260 VPREB3Q9UKI3 123 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 SMIM30A4D0T7 59 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 NAP1L6A6NFF2 107 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 SULT1B1O43704 296 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 SNAPC5O75971 98 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 TFF1P04155 84 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 SAA4P35542 130 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 FUT6P51993 359 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 AP3S2P59780 193 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
HMGN1-211ENST00000471260 GPR176Q14439 515 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 ZNF782Q6ZMW2 699 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-211ENST00000471260 FAM185AQ8N0U4 392 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 CD177Q8N6Q3 437 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 ZSCAN4Q8NAM6 433 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-211ENST00000471260 SMIM4Q8WVI0 70 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 PP6455Q8WZ26 134 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 GHSRQ92847 366 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 PELI1Q96FA3 418 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 HYLS1Q96M11 299 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 CHST5Q9GZS9 411 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 ABCG5Q9H222 651 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 HEXA-AS1Q9H8Q6 139 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 SEBOXQ9HB31 216 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-211ENST00000471260 ETV7Q9Y603 341 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 MGAM2Q2M2H8 2515 aa11.03□□□□□ -0.64
HMGN1-211ENST00000471260 LINC00854A0A1B0GVQ3 168 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 A6NIN4 97 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 PRAF2O60831 178 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 TK1P04183 234 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 CHRM2P08172 466 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 OR12D2P58182 307 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 KLRD1Q13241 179 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 CNN3Q15417 329 aaKnown RBP11.02□□□□□ -0.65
HMGN1-211ENST00000471260 UBE2V2Q15819 145 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 TAF9Q16594 264 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 AANATQ16613 207 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 TMEM244Q5VVB8 128 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 TREML4Q6UXN2 200 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 BEND2Q8NDZ0 799 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 DNAAF1Q8NEP3 725 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 LINC01006Q8NI28 216 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 ZNF488Q96MN9 340 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 CITED1Q99966 193 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 MEGF9Q9H1U4 602 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 C16orf95Q9H693 158 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 ELL3Q9HB65 397 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-211ENST00000471260 C19orf12Q9NSK7 152 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 GNG8Q9UK08 70 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 RBMX2Q9Y388 322 aaKnown RBP11.02□□□□□ -0.65
HMGN1-211ENST00000471260 RNF114Q9Y508 228 aa11.02□□□□□ -0.65
HMGN1-211ENST00000471260 TRBV2A0A0J9YWF9 115 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 FAM230AA0A1W2PPH8 454 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 E9PI62 339 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 K7N7A8 449 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 AIPO00170 330 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 TIMM23O14925 209 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 TSPAN9O75954 239 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 ISG15P05161 165 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 CALCBP10092 127 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 CD83Q01151 205 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 INSL4Q14641 139 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 ODF4Q2M2E3 257 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 TMEM200BQ69YZ2 307 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 DHRS7BQ6IAN0 325 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-211ENST00000471260 HCP5Q6MZN7 132 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 FDX2Q6P4F2 183 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 ANGPTL5Q86XS5 388 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 Q8IYB0 196 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 PRSS35Q8N3Z0 413 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 TOMM5Q8N4H5 51 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 BORCS8Q96FH0 119 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 FYTTD1Q96QD9 318 aaKnown RBP11.01□□□□□ -0.65
HMGN1-211ENST00000471260 RANBP3Q9H6Z4 567 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-211ENST00000471260 MCUBQ9NWR8 336 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 ZNF281Q9Y2X9 895 aa11.01□□□□□ -0.65
HMGN1-211ENST00000471260 LOC107986453A0A1B0GWG9 222 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 A0A1W2PRD5 423 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 A0A1W2PRF3 423 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 A0A1W2PRM7 423 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 RBP4P02753 201 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 ANXA3P12429 323 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 ATF1P18846 271 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 BTCP35070 178 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 RBP2P50120 134 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 CCR9P51686 369 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 DLX1P56177 255 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 PROK1P58294 105 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 ERVFRD-1P60508 538 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 RPS11P62280 158 aaKnown RBP eCLIP11□□□□□ -0.65
HMGN1-211ENST00000471260 TP53I3Q53FA7 332 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 BRICD5Q6PL45 260 aa11□□□□□ -0.65
HMGN1-211ENST00000471260 Q6ZSV7 163 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms