RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ZNF773Q6PK81 442 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ANGPTL8Q6UXH0 198 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 EIF3MQ7L2H7 374 aaKnown RBP0.23□□□□□ -2.37
UBXN4-207ENST00000471246 SCXQ7RTU7 201 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 VTCN1Q7Z7D3 282 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 LINC00596Q86U02 117 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 BBS5Q8N3I7 341 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 KIF2BQ8N4N8 673 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ARL6IP6Q8N6S5 226 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 OR10Z1Q8NGY1 313 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF563Q8TA94 476 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 UBA3Q8TBC4 463 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 SMIM8Q96KF7 97 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 C9orf72Q96LT7 481 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 HSPB9Q9BQS6 159 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 CCDC77Q9BR77 488 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 UPF3BQ9BZI7 483 aaKnown RBP0.23□□□□□ -2.37
UBXN4-207ENST00000471246 FAM192AQ9GZU8 254 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 DEFB129Q9H1M3 183 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 OR2D2Q9H210 308 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 PORCNQ9H237 461 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 MFSD1Q9H3U5 465 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ELOVL6Q9H5J4 265 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 PRORYQ9H606 182 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 CD209Q9NNX6 404 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 MRPS30Q9NP92 439 aaKnown RBP0.23□□□□□ -2.37
UBXN4-207ENST00000471246 PRSS16Q9NQE7 514 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 CYB5R1Q9UHQ9 305 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 VPREB3Q9UKI3 123 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 WNK2Q9Y3S1 2297 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 COL4A2P08572 1712 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 TRPM3Q9HCF6 1732 aaPredicted RBP0.23□□□□□ -2.37
UBXN4-207ENST00000471246 RB1CC1Q8TDY2 1594 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 PCDH15Q96QU1 1955 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 TULP4Q9NRJ4 1543 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ROS1P08922 2347 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 ERVK-7P63135 1459 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 NYNRINQ9P2P1 1898 aaKnown RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 URB1O60287 2271 aaKnown RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 WRNQ14191 1432 aaPredicted RBP eCLIP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 EEA1Q15075 1411 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 SMG6Q86US8 1419 aaKnown RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 INSRP06213 1382 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 FLT4P35916 1363 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 PREX1Q8TCU6 1659 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 TRBV24-1A0A075B6N3 115 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 IGHV2OR16-5A0A0B4J2B6 119 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 LOC389332A0A1B0GUA5 103 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 LRRIQ4A6NIV6 560 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 SIGLEC16A6NMB1 481 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 FNDC10F2Z333 226 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 KLRC4-KLRK1H3BQV0 150 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 SIVA1O15304 175 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 POP7O75817 140 aaKnown RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 ETHE1O95571 254 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 PTTG1O95997 202 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 AGTP01019 485 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 PDYNP01213 254 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 GPX1P07203 203 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 RHOCP08134 193 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 OR12D1P0DN82 309 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 IMPA1P29218 277 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 GPR1P46091 355 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 GABRA4P48169 554 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 CLDN6P56747 220 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 DEFA6Q01524 100 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 RAD51Q06609 339 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 BEX5Q5H9J7 111 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 MLIPQ5VWP3 458 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 TMEM215Q68D42 235 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 NIPAL1Q6NVV3 410 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 TMEM53Q6P2H8 277 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 Q6ZRN7 208 aaPredicted RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 OTUD6AQ7L8S5 288 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 LUZP2Q86TE4 346 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 RBM45Q8IUH3 476 aaKnown RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 CYP4Z2PQ8N1L4 340 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 SLC25A45Q8N413 288 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 TRAM1L1Q8N609 369 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 CCNYL1Q8N7R7 359 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 OR4C16Q8NGL9 310 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 SGMS2Q8NHU3 365 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 CA5BP1Q8WTZ4 195 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 MAL2Q969L2 176 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 DDIT4LQ96D03 193 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 YPEL4Q96NS1 127 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 OPALINQ96PE5 141 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 GABRG3Q99928 467 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF251Q9BRH9 671 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 TMED9Q9BVK6 235 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 MRPL32Q9BYC8 188 aaKnown RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 SLC19A3Q9BZV2 496 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 TSGA10Q9BZW7 698 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 NAA50Q9GZZ1 169 aaKnown RBP0.22□□□□□ -2.37
UBXN4-207ENST00000471246 ZC4H2Q9NQZ6 224 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 ADA2Q9NZK5 511 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 PSORS1C2Q9UIG4 136 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 ABCA1O95477 2261 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 HSPG2P98160 4391 aa0.22□□□□□ -2.37
UBXN4-207ENST00000471246 NRKQ7Z2Y5 1582 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms