RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 OR5M11Q96RB7 305 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 S100A13Q99584 98 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 METTL9Q9H1A3 318 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 ACOT13Q9NPJ3 140 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 PCDHB16Q9NRJ7 776 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 IL36GQ9NZH8 169 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 CKLFQ9UBR5 152 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 FOXJ3Q9UPW0 622 aa15.35■□□□□ 0.05
COL7A1-207ENST00000467985 TRAV24A0A0B4J272 114 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 KBTBD11-OT1A0A1B0GTJ5 212 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 PSMB9P28065 219 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 ZNF93P35789 620 aaPredicted RBP15.34■□□□□ 0.05
COL7A1-207ENST00000467985 EMX1Q04741 257 aaPredicted RBP15.34■□□□□ 0.05
COL7A1-207ENST00000467985 NEDD8Q15843 81 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 YIF1BQ5BJH7 314 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 DDI2Q5TDH0 399 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 ZFP41Q8N8Y5 198 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 FAM110DQ8TAY7 271 aaPredicted RBP15.34■□□□□ 0.05
COL7A1-207ENST00000467985 GHSRQ92847 366 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 UFD1Q92890 307 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 AKR1E2Q96JD6 320 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 PPIL3Q9H2H8 161 aaKnown RBP15.34■□□□□ 0.05
COL7A1-207ENST00000467985 IFT22Q9H7X7 185 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 ING3Q9NXR8 418 aa15.34■□□□□ 0.05
COL7A1-207ENST00000467985 SIRT4Q9Y6E7 314 aaPredicted RBP15.34■□□□□ 0.05
COL7A1-207ENST00000467985 MEIKINA0A087WXM9 373 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 HSPB6O14558 160 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 ZNF780AO75290 641 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-207ENST00000467985 PEX14O75381 377 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 HTR3BO95264 441 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 CSTBP04080 98 aaKnown RBP15.33■□□□□ 0.04
COL7A1-207ENST00000467985 BDKRB2P30411 391 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 C17orf58Q2M2W7 97 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 Q499Y3 187 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 ARSJQ5FYB0 599 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-207ENST00000467985 NHLRC3Q5JS37 347 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 DMKNQ6E0U4 476 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-207ENST00000467985 BAIAP2L2Q6UXY1 529 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 LINC00596Q86U02 117 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 LINC00574Q9H8X3 128 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 ZNF286AQ9HBT8 521 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 SERTAD4Q9NUC0 356 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 KIF25Q9UIL4 384 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 ING4Q9UNL4 249 aa15.33■□□□□ 0.04
COL7A1-207ENST00000467985 LSM2Q9Y333 95 aaKnown RBP15.33■□□□□ 0.04
COL7A1-207ENST00000467985 TRBV5-5A0A0J9YX44 114 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 OOSP1A8MZH6 123 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 BUB1B-PAK6H3BSN5 160 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 GPX5O75715 221 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 CGB3P0DN86 165 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 CGB7P0DN87 165 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 JUNBP17275 347 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-207ENST00000467985 CELP19835 753 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 GLP1RP43220 463 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 OR3A4PP47883 348 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 HLA-DRB5Q30154 266 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 PIGYQ3MUY2 71 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 PDLIM3Q53GG5 364 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-207ENST00000467985 CCDC144NLQ6NUI1 221 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 OSR2Q8N2R0 312 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 ZNF485Q8NCK3 441 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 OR10K1Q8NGX5 313 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 CAPSLQ8WWF8 208 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 MGLLQ99685 303 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 LIN7BQ9HAP6 207 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 CALYQ9NYX4 217 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 ST3GAL6Q9Y274 331 aa15.32■□□□□ 0.04
COL7A1-207ENST00000467985 FAM172BPA6NC97 362 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 FBXO24O75426 580 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 CDRT1O95170 752 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 LALBAP00709 142 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 IGFBP3P17936 291 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-207ENST00000467985 NFYBP25208 207 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 GDNFP39905 211 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 RBM11P57052 281 aaKnown RBP15.31■□□□□ 0.04
COL7A1-207ENST00000467985 MLLT11Q13015 90 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-207ENST00000467985 HABP2Q14520 560 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-207ENST00000467985 C11orf44Q8N8P7 122 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 OR10A7Q8NGE5 316 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 OR9G1Q8NH87 305 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 KIRREL1Q96J84 757 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 DPCDQ9BVM2 203 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-207ENST00000467985 MRPS26Q9BYN8 205 aaKnown RBP15.31■□□□□ 0.04
COL7A1-207ENST00000467985 ISYNA1Q9NPH2 558 aa15.31■□□□□ 0.04
COL7A1-207ENST00000467985 AMMECR1Q9Y4X0 333 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-207ENST00000467985 OR7C1O76099 320 aaPredicted RBP15.3■□□□□ 0.04
COL7A1-207ENST00000467985 IL1AP01583 271 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 MNDAP41218 407 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 VDAC2P45880 294 aaPredicted RBP15.3■□□□□ 0.04
COL7A1-207ENST00000467985 BLCAPP62952 87 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 GPR176Q14439 515 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 TPTE2P1Q5T6R2 138 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 UBE2UQ5VVX9 321 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 RSBN1Q5VWQ0 802 aaPredicted RBP15.3■□□□□ 0.04
COL7A1-207ENST00000467985 SLC16A12Q6ZSM3 486 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 SUMF2Q8NBJ7 301 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 OR13A1Q8NGR1 328 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 WNT10AQ9GZT5 417 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 MMP28Q9H239 520 aa15.3■□□□□ 0.04
COL7A1-207ENST00000467985 IDI2-AS1Q9NZ38 188 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms