RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 H3BP45 60 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 SMLR1H3BR10 107 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 TOR1AO14656 332 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 POP7O75817 140 aaKnown RBP2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 SLC35E2BP0CK96 405 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 CD34P28906 385 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 MAGEA6P43360 314 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 RAB25P57735 213 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 C1QTNF8P60827 252 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 TMEM241Q24JQ0 296 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 CDKL4Q5MAI5 379 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 AMMECR1LQ6DCA0 310 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 ADM2Q7Z4H4 148 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 C10orf107Q8IVU9 208 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZIC4Q8N9L1 334 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 DNAAF3Q8N9W5 541 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZNF738Q8NE65 137 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 CMTM2Q8TAZ6 248 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 ACTL9Q8TC94 416 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 IL20Q9NYY1 176 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 ARAP3Q8WWN8 1544 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 ADCY9O60503 1353 aa2.21□□□□□ -2.06
CDC42BPA-211ENST00000466538 SEC16AO15027 2179 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 IGKV3D-11A0A0A0MRZ8 115 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 TMEM213A2RRL7 107 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 TMEM250H0YL14 139 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 KLRC4-KLRK1H3BQV0 150 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 UGT2B11O75310 529 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 PDYNP01213 254 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 IGLV6-57P01721 117 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 IGHV3-53P01767 116 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 HRES1P13985 223 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 PYCR1P32322 319 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 KLF3P57682 345 aaPredicted RBP2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 RHOAP61586 193 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 IHHQ14623 411 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 CASP8Q14790 479 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 MMDQ15546 238 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 PDZD11Q5EBL8 140 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZNF660Q6AZW8 331 aaPredicted RBP2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 PTRHD1Q6GMV3 140 aaKnown RBP2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 DGAT2L6Q6ZPD8 337 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 CLEC20AQ6ZU45 233 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 OR8J2Q8NGG1 315 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 CLDN23Q96B33 292 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 FXYD5Q96DB9 178 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 MRAP2Q96G30 205 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 PGLYRP3Q96LB9 341 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 TAPBPLQ9BX59 468 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 EBPLQ9BY08 206 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 WDR54Q9H977 334 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 ASF1BQ9NVP2 202 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 R4GN34 69 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 URGCP-MRPS24S4R325 110 aa2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 LRPPRCP42704 1394 aaKnown RBP2.2□□□□□ -2.06
CDC42BPA-211ENST00000466538 VWA8A3KMH1 1905 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 IGHV1-45A0A0A0MS14 117 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 C1orf232A0A0U1RR37 186 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 FABP12A6NFH5 140 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZNF729A6NN14 1252 aaPredicted RBP2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 SULT1C2O00338 296 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 COCHO43405 550 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 PSIP1O75475 530 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 TNFAIP8O95379 198 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 IGKV1D-33P01593 117 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 IGKV1-33P01594 117 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 SPNP16150 400 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 AKR1C4P17516 323 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 ATF1P18846 271 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 PRPS1L1P21108 318 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 CD40LGP29965 261 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 FOXA1P55317 472 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 OR10A3P58181 314 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 BAMBIQ13145 260 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 RAB31Q13636 194 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 TAF9Q16594 264 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZCWPW2Q504Y3 356 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 OR10J3Q5JRS4 329 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 RBM48Q5RL73 367 aaKnown RBP2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 OLIG3Q7RTU3 272 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 PHOSPHO2Q8TCD6 241 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 APOBEC3DQ96AK3 386 aaPredicted RBP2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 CCDC127Q96BQ5 260 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 DDIT4LQ96D03 193 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 MBOAT7Q96N66 472 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 FAAP24Q9BTP7 215 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 ZNF586Q9NXT0 402 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 TAS2R13Q9NYV9 303 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 COMMD9Q9P000 198 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 NAGKQ9UJ70 344 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 POMPQ9Y244 141 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 RAB3GAP2Q9H2M9 1393 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 PLB1Q6P1J6 1458 aa2.19□□□□□ -2.06
CDC42BPA-211ENST00000466538 A8MWP4 228 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 PHYHO14832 338 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 TOX3O15405 576 aaPredicted RBP2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 CRTAPO75718 401 aaPredicted RBP2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 CPSF4O95639 269 aaKnown RBP2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 GPR75O95800 540 aa2.18□□□□□ -2.06
CDC42BPA-211ENST00000466538 TRGV3P03979 118 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms