RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 UCP3P55916 312 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 S100A10P60903 97 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 CYCSP99999 105 aaKnown RBP11.46□□□□□ -0.58
UBE4B-206ENST00000466379 SRSF7Q16629 238 aaKnown RBP eCLIP11.46□□□□□ -0.58
UBE4B-206ENST00000466379 SPIN3Q5JUX0 258 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 GGNBP1Q5YKI7 109 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 ACOT7LQ6ZUV0 252 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 PRR18Q8N4B5 295 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 FAM169BQ8N8A8 192 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 MUCL1Q96DR8 90 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 RRNAD1Q96FB5 475 aaKnown RBP11.46□□□□□ -0.58
UBE4B-206ENST00000466379 KIRREL1Q96J84 757 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 SYT3Q9BQG1 590 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 RHOFQ9HBH0 211 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 KCNIP3Q9Y2W7 256 aa11.46□□□□□ -0.58
UBE4B-206ENST00000466379 A0A0D9SG52 128 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 hCG_1807616A0A1W2PRN6 198 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 HSD17B6O14756 317 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 PHF1O43189 567 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-206ENST00000466379 HAND1O96004 215 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 HLA-DRB3P79483 266 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 ZNF146Q15072 292 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 IAH1Q2TAA2 248 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-206ENST00000466379 PCSK4Q6UW60 755 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 WDR82Q6UXN9 313 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 ZNF818PQ6ZRF7 136 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 OR2Z1Q8NG97 314 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 IL1F10Q8WWZ1 152 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 TP53RKQ96S44 253 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 RAXQ9Y2V3 346 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 CADP27708 2225 aa11.45□□□□□ -0.58
UBE4B-206ENST00000466379 TRBV6-6A0A0A6YYG2 114 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 KANTRA0A1W2PQU2 76 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 LEUTXA8MZ59 168 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 ATP6V1G2-DDX39BF2Z307 99 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 SH2D1BO14796 132 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 OR2F2O95006 317 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 RLN2P04090 185 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 CCKARP32238 428 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 OR2F1Q13607 317 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 ZNF345Q14585 488 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 SPRNQ5BIV9 151 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 CLLU1Q5K131 121 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 ZNF880Q6PDB4 577 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 LYZL2Q7Z4W2 148 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 LDLRAD3Q86YD5 345 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 GAPTQ8N292 157 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 INO80EQ8NBZ0 244 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-206ENST00000466379 GLYATL2Q8WU03 294 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 GSX2Q9BZM3 304 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 RIMS4Q9H426 269 aaPredicted RBP11.44□□□□□ -0.58
UBE4B-206ENST00000466379 HES4Q9HCC6 221 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 OR1A1Q9P1Q5 309 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 PTPRQQ9UMZ3 2332 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 MSGN1A6NI15 193 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 BCL2L11O43521 198 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 PSPNO60542 156 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 CRYAAP02489 173 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 GLAP06280 429 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 RAB14P61106 215 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 IL15RAQ13261 267 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 MEX3BQ6ZN04 569 aaKnown RBP11.44□□□□□ -0.58
UBE4B-206ENST00000466379 ZNF497Q6ZNH5 498 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 SLC51BQ86UW2 128 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 ZNF565Q8N9K5 539 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 LHFPL5Q8TAF8 219 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 GALNT14Q96FL9 552 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 SLC5A7Q9GZV3 580 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 CCL28Q9NRJ3 127 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 TRAPPC2LQ9UL33 140 aa11.44□□□□□ -0.58
UBE4B-206ENST00000466379 CHD3Q12873 2000 aaKnown RBP11.44□□□□□ -0.58
UBE4B-206ENST00000466379 LINC00862A6NCI5 91 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 ZSCAN5BA6NJL1 495 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 ARID1AO14497 2285 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 TNFSF12O43508 249 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 B3GALNT1O75752 331 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 TUSC2O75896 110 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 PTBP3O95758 552 aaKnown RBP11.43□□□□□ -0.58
UBE4B-206ENST00000466379 HOXD4P09016 255 aaPredicted RBP11.43□□□□□ -0.58
UBE4B-206ENST00000466379 TUBG1P23258 451 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 KCNJ3P48549 501 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 LUMP51884 338 aaPredicted RBP11.43□□□□□ -0.58
UBE4B-206ENST00000466379 ACP7Q6ZNF0 438 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 LIAT1Q6ZQX7 453 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 TBC1D26Q86UD7 250 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 CCDC71LQ8N9Z2 235 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 ST8SIA2Q92186 375 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 MSI2Q96DH6 328 aaKnown RBP11.43□□□□□ -0.58
UBE4B-206ENST00000466379 ZNF471Q9BX82 626 aaPredicted RBP11.43□□□□□ -0.58
UBE4B-206ENST00000466379 TUBG2Q9NRH3 451 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 MPPED1O15442 326 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 IFNA21P01568 189 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 PRSS54Q6PEW0 395 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 OR4A4PQ8NGN8 299 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 OR1S1Q8NH92 325 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 OR10J5Q8NHC4 309 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 DMRTA2Q96SC8 542 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 TLNRD1Q9H1K6 362 aa11.43□□□□□ -0.58
UBE4B-206ENST00000466379 TRBV6-7A0A0A0MS04 114 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms