RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SLC2A9Q9NRM0 540 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 SH3BGRL2Q9UJC5 107 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 H0YIZ8 118 aa15.47■□□□□ 0.07
COL9A3-205ENST00000466192 PPYP01298 95 aa15.47■□□□□ 0.07
COL9A3-205ENST00000466192 RLN2P04090 185 aa15.47■□□□□ 0.07
COL9A3-205ENST00000466192 Q8IYB0 196 aa15.47■□□□□ 0.07
COL9A3-205ENST00000466192 C1orf174Q8IYL3 243 aa15.47■□□□□ 0.07
COL9A3-205ENST00000466192 KCNIP3Q9Y2W7 256 aa15.47■□□□□ 0.07
COL9A3-205ENST00000466192 OR5AC1P0C628 307 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 ZNF44P15621 663 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 UCNP55089 124 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 RBM39Q14498 530 aaKnown RBP15.46■□□□□ 0.07
COL9A3-205ENST00000466192 SRSF7Q16629 238 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL9A3-205ENST00000466192 C20orf204Q6ZNR8 217 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 C11orf53Q8IXP5 236 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 OR11L1Q8NGX0 322 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 PIK3IP1Q96FE7 263 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 NAA60Q9H7X0 242 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.46■□□□□ 0.07
COL9A3-205ENST00000466192 DEGS1O15121 323 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 BCL2L11O43521 198 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 RAB32Q13637 225 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 C3orf36Q3SXR2 165 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 RGS7BPQ6MZT1 257 aaPredicted RBP15.46■□□□□ 0.07
COL9A3-205ENST00000466192 ZNF826PQ6ZT77 177 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 MRPL30Q8TCC3 161 aaKnown RBP15.46■□□□□ 0.07
COL9A3-205ENST00000466192 ST8SIA2Q92186 375 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 CXXC4Q9H2H0 198 aa15.46■□□□□ 0.07
COL9A3-205ENST00000466192 PLCE1Q9P212 2302 aa15.46■□□□□ 0.06
COL9A3-205ENST00000466192 NXPH2O95156 264 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 LUMP51884 338 aaPredicted RBP15.45■□□□□ 0.06
COL9A3-205ENST00000466192 HERPUD1Q15011 391 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 POC1AQ8NBT0 407 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 GTF3AQ92664 365 aaKnown RBP15.45■□□□□ 0.06
COL9A3-205ENST00000466192 ZNF471Q9BX82 626 aaPredicted RBP15.45■□□□□ 0.06
COL9A3-205ENST00000466192 PIGMQ9H3S5 423 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 OR5AC2Q9NZP5 309 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 KIF25Q9UIL4 384 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 TRBV6-7A0A0A0MS04 114 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 SLC34A2O95436 690 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 CRYAAP02489 173 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 TK1P04183 234 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 GLAP06280 429 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 CCKARP32238 428 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 UCP3P55916 312 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 IAH1Q2TAA2 248 aaPredicted RBP15.45■□□□□ 0.06
COL9A3-205ENST00000466192 PRAMEF6Q5VXH4 476 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 MRGPRGQ86SM5 289 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 LRP11Q86VZ4 500 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 RBPMSQ93062 196 aaKnown RBP15.45■□□□□ 0.06
COL9A3-205ENST00000466192 RRNAD1Q96FB5 475 aaKnown RBP15.45■□□□□ 0.06
COL9A3-205ENST00000466192 ATP23Q9Y6H3 246 aa15.45■□□□□ 0.06
COL9A3-205ENST00000466192 ICE1Q9Y2F5 2266 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 A0A1B0GWJ7 208 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 TRDCB7Z8K6 153 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 ATP6V1G2-DDX39BF2Z307 99 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 OR2H2O95918 312 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 NMBP08949 121 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 ACAA1P09110 424 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-205ENST00000466192 S100A10P60903 97 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 UBA52P62987 128 aaKnown RBP15.44■□□□□ 0.06
COL9A3-205ENST00000466192 HOXA4Q00056 320 aaPredicted RBP15.44■□□□□ 0.06
COL9A3-205ENST00000466192 TMEM187Q14656 261 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 FOXRED2Q8IWF2 684 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 MRPL24Q96A35 216 aaKnown RBP15.44■□□□□ 0.06
COL9A3-205ENST00000466192 GALNT14Q96FL9 552 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 SYT3Q9BQG1 590 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 RSRP1Q9BUV0 290 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 RASL12Q9NYN1 266 aa15.44■□□□□ 0.06
COL9A3-205ENST00000466192 KIR2DS1A0A191URI9 304 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 SIRPB1O00241 398 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 SLC33A1O00400 549 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-205ENST00000466192 RCC1P18754 421 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-205ENST00000466192 KIR2DS4P43632 304 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 NKX6-1P78426 367 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-205ENST00000466192 KIR2DS1Q14954 304 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 ZNF146Q15072 292 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 GGNBP1Q5YKI7 109 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 RELL2Q8NC24 303 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-205ENST00000466192 TLNRD1Q9H1K6 362 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 RIMS4Q9H426 269 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-205ENST00000466192 HES4Q9HCC6 221 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 DUSP13Q9UII6 198 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 IGKV1-6A0A0C4DH72 117 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 F5H0A9 414 aaPredicted RBP15.43■□□□□ 0.06
COL9A3-205ENST00000466192 TSPAN4O14817 238 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 DIRAS3O95661 229 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 IFNA21P01568 189 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 IL15RAQ13261 267 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 PRSS54Q6PEW0 395 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 SECTM1Q8WVN6 248 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 CXorf58Q96LI9 332 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 MED9Q9NWA0 146 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 MEMO1Q9Y316 297 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 KIAA2026Q5HYC2 2103 aa15.43■□□□□ 0.06
COL9A3-205ENST00000466192 TRBV6-6A0A0A6YYG2 114 aa15.42■□□□□ 0.06
COL9A3-205ENST00000466192 WNT9BO14905 357 aa15.42■□□□□ 0.06
COL9A3-205ENST00000466192 ZP3P21754 424 aa15.42■□□□□ 0.06
COL9A3-205ENST00000466192 GNRHRP30968 328 aa15.42■□□□□ 0.06
COL9A3-205ENST00000466192 PAN3Q58A45 887 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms