RNA–Protein interactions for RNA: ENST00000465630.1

UBR3-207, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-207ENST00000465630 ZNF426Q9BUY5 554 aa-0.52□□□□□ -2.49
UBR3-207ENST00000465630 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.52□□□□□ -2.49
UBR3-207ENST00000465630 LAMA5O15230 3695 aa-0.52□□□□□ -2.49
UBR3-207ENST00000465630 MED12Q93074 2177 aa-0.52□□□□□ -2.49
UBR3-207ENST00000465630 TGP01266 2768 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 STAB2Q8WWQ8 2551 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 H0Y8G0 127 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 CECR9P0C854 216 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 LPAR6P43657 344 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 SULT1E1P49888 294 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 RGS8P57771 180 aaPredicted RBP-0.53□□□□□ -2.49
UBR3-207ENST00000465630 ATP6V0D1P61421 351 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 RELAQ04206 551 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 CIRBPQ14011 172 aaKnown RBP-0.53□□□□□ -2.49
UBR3-207ENST00000465630 PSG3Q16557 428 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 ANKDD1AQ495B1 522 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 TPGS1Q6ZTW0 290 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 FAM122BQ7Z309 247 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 NT5CQ8TCD5 201 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 RASD2Q96D21 266 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 MBOAT7Q96N66 472 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 SHCBP1LQ9BZQ2 653 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 DEFB129Q9H1M3 183 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 SDHAF3Q9NRP4 125 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 DDIT4Q9NX09 232 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 PLAC8Q9NZF1 115 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 PSMD13Q9UNM6 376 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 STK38LQ9Y2H1 464 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 CNTRLQ7Z7A1 2325 aa-0.53□□□□□ -2.49
UBR3-207ENST00000465630 AK9Q5TCS8 1911 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 WDR19Q8NEZ3 1342 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 HSPG2P98160 4391 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 SNRNP200O75643 2136 aaKnown RBP-0.54□□□□□ -2.5
UBR3-207ENST00000465630 RALBP11234 206 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 M6PRP20645 277 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 SLC38A11Q08AI6 406 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 TSPAN31Q12999 210 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 CDK5R1Q15078 307 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 SURF2Q15527 256 aaPredicted RBP-0.54□□□□□ -2.5
UBR3-207ENST00000465630 HNRNPA1L2Q32P51 320 aaKnown RBP-0.54□□□□□ -2.5
UBR3-207ENST00000465630 CEACAM21Q3KPI0 293 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 CCDC121Q6ZUS5 278 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 SLC35F6Q8N357 371 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 C8orf31Q8N9H6 132 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 C15orf53Q8NAA6 179 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 RILPQ96NA2 401 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 OR2M4Q96R27 311 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 ALX4Q9H161 411 aaPredicted RBP-0.54□□□□□ -2.5
UBR3-207ENST00000465630 SMDT1Q9H4I9 107 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 ADA2Q9NZK5 511 aa-0.54□□□□□ -2.5
UBR3-207ENST00000465630 PEF1Q9UBV8 284 aaKnown RBP-0.54□□□□□ -2.5
UBR3-207ENST00000465630 ZNF106Q9H2Y7 1883 aaKnown RBP-0.54□□□□□ -2.5
UBR3-207ENST00000465630 ATRNO75882 1429 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 DCHS2Q6V1P9 2916 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 DSPP15924 2871 aaKnown RBP-0.55□□□□□ -2.5
UBR3-207ENST00000465630 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.55□□□□□ -2.5
UBR3-207ENST00000465630 IGHV3OR15-7A0A075B7D8 119 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 IGKV1-12A0A0C4DH73 117 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 RNASEK-C17orf49H0YIS7 233 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 H3BN98 237 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 UPK2O00526 184 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 IGKV1D-12P01611 117 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 ATF1P18846 271 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 PRTN3P24158 256 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 IL12BP29460 328 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 GPR1P46091 355 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 RPL14P50914 215 aaKnown RBP-0.55□□□□□ -2.5
UBR3-207ENST00000465630 C21orf59P57076 290 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 TOMM34Q15785 309 aaPredicted RBP-0.55□□□□□ -2.5
UBR3-207ENST00000465630 KRTAP19-8Q3LI54 63 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 GRINAQ7Z429 371 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 SETD3Q86TU7 594 aaPredicted RBP-0.55□□□□□ -2.5
UBR3-207ENST00000465630 LRRC28Q86X40 367 aaPredicted RBP-0.55□□□□□ -2.5
UBR3-207ENST00000465630 PQLC3Q8N755 202 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 CCL17Q92583 94 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 FMC1Q96HJ9 113 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 C9orf72Q96LT7 481 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 JSRP1Q96MG2 331 aaPredicted RBP-0.55□□□□□ -2.5
UBR3-207ENST00000465630 LINC01587Q99440 93 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 POMKQ9H5K3 350 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 TMEM185BQ9H7F4 350 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 MTCH2Q9Y6C9 303 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 KMT2AQ03164 3969 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 KDM5BQ9UGL1 1544 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 RYR1P21817 5038 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 BRWD1Q9NSI6 2320 aa-0.55□□□□□ -2.5
UBR3-207ENST00000465630 SONP18583 2426 aaKnown RBP-0.56□□□□□ -2.5
UBR3-207ENST00000465630 PTPRJQ12913 1337 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 ZNF532Q9HCE3 1301 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 LOC100653049A0A140TA62 436 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 FAM240AA0A1B0GVK7 77 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 A0A1W2PRD5 423 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 SPOPO43791 374 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 KRT34O76011 436 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 UBCP0CG48 685 aaKnown RBP-0.56□□□□□ -2.5
UBR3-207ENST00000465630 NQO1P15559 274 aaKnown RBP-0.56□□□□□ -2.5
UBR3-207ENST00000465630 HCCSP53701 268 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 CLDN6P56747 220 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 ZNF90Q03938 601 aa-0.56□□□□□ -2.5
UBR3-207ENST00000465630 BNIP2Q12982 314 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms