RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 TNFRSF14Q92956 283 aa13.89□□□□□ -0.19
USP39-211ENST00000465282 LHX4Q969G2 390 aa13.89□□□□□ -0.19
USP39-211ENST00000465282 MS4A7Q9GZW8 240 aaPredicted RBP13.89□□□□□ -0.19
USP39-211ENST00000465282 LINC00574Q9H8X3 128 aa13.89□□□□□ -0.19
USP39-211ENST00000465282 KIF25Q9UIL4 384 aa13.89□□□□□ -0.19
USP39-211ENST00000465282 IGHV1-69DA0A0B4J2H0 117 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 IGHV1-69P01742 117 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 IGHV4-38-2P0DP08 117 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 SLC2A2P11168 524 aaPredicted RBP13.88□□□□□ -0.19
USP39-211ENST00000465282 LSM3P62310 102 aaKnown RBP13.88□□□□□ -0.19
USP39-211ENST00000465282 GPR107Q5VW38 600 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 HEPN1Q6WQI6 88 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 SLC16A12Q6ZSM3 486 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 PLPPR1Q8TBJ4 325 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 BCL7BQ9BQE9 202 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 NICN1Q9BSH3 213 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 KCNK15Q9H427 330 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 RAB9BQ9NP90 201 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 SIRT7Q9NRC8 400 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 PLEKHJ1Q9NW61 149 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 ETAA1Q9NY74 926 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 ETV7Q9Y603 341 aa13.88□□□□□ -0.19
USP39-211ENST00000465282 A0A0A6YYJ9 748 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 KBTBD11-OT1A0A1B0GTJ5 212 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 SMIM30A4D0T7 59 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 POM121CA8CG34 1229 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 RNASEK-C17orf49H0YIS7 233 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 CLPXO76031 633 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 SCGNO76038 276 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 MT-ND4P03905 459 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 CLEC2LP0C7M8 214 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 CGB3P0DN86 165 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 CGB7P0DN87 165 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 IGHV1-8P0DP01 117 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 RPS19P39019 145 aaKnown RBP13.87□□□□□ -0.19
USP39-211ENST00000465282 VEGFCP49767 419 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 ARL6IP1Q15041 203 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 CTF1Q16619 201 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 TUSC1Q2TAM9 212 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 TRAT1Q6PIZ9 186 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 BRICD5Q6PL45 260 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 USP43Q70EL4 1123 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 OR10A7Q8NGE5 316 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 RIMS4Q9H426 269 aaPredicted RBP13.87□□□□□ -0.19
USP39-211ENST00000465282 ABRACLQ9P1F3 81 aa13.87□□□□□ -0.19
USP39-211ENST00000465282 JMJD1CQ15652 2540 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 A0A0A6YYD4 124 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 FOXI3A8MTJ6 420 aaPredicted RBP13.86□□□□□ -0.19
USP39-211ENST00000465282 SOCS1O15524 211 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 ORC5O43913 435 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 SERPINB10P48595 397 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 VBP1P61758 197 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 NCS1P62166 190 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 MIDNQ504T8 468 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 NKAPLQ5M9Q1 402 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 IDNKQ5T6J7 187 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 Q6ZTK2 550 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 C6orf201Q7Z4U5 140 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 ZNF554Q86TJ5 538 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 OR13D1Q8NGV5 346 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 ZNF418Q8TF45 676 aaPredicted RBP13.86□□□□□ -0.19
USP39-211ENST00000465282 RAB2BQ8WUD1 216 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 SLC25A46Q96AG3 418 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 KCTD12Q96CX2 325 aaKnown RBP13.86□□□□□ -0.19
USP39-211ENST00000465282 SUCNR1Q9BXA5 334 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 ING3Q9NXR8 418 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 ZNF69Q9UC07 566 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 SESN1Q9Y6P5 492 aa13.86□□□□□ -0.19
USP39-211ENST00000465282 UBE2QL1A1L167 161 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 NPIPB11E5RHQ5 1161 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 GLP1RP43220 463 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 TMBIM6P55061 237 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 TMEM50BP56557 158 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 C17orf58Q2M2W7 97 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 C6orf183Q5T699 404 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 OR13A1Q8NGR1 328 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 RAB3CQ96E17 227 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 SULT4A1Q9BR01 284 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 FAAP24Q9BTP7 215 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 TRAPPC2LQ9UL33 140 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 SPATA2Q9UM82 520 aa13.85□□□□□ -0.19
USP39-211ENST00000465282 A0A0B4J203 849 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 RAB27BO00194 218 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 NPFFO15130 113 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 SNRPBP14678 240 aaKnown RBP13.84□□□□□ -0.19
USP39-211ENST00000465282 CDK2P24941 298 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 TGFBR1P36897 503 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 EFNB2P52799 333 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 DYNC1I2Q13409 638 aaKnown RBP13.84□□□□□ -0.19
USP39-211ENST00000465282 TMEM30BQ3MIR4 351 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 HCP5Q6MZN7 132 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 RBMS3Q6XE24 437 aaKnown RBP13.84□□□□□ -0.19
USP39-211ENST00000465282 BRD3OSQ6XYD6 125 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 RTN4RL2Q86UN3 420 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 OR11H6Q8NGC7 330 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 OR10R2Q8NGX6 335 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 LGALS14Q8TCE9 139 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 MRGPRDQ8TDS7 321 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 JMJD8Q96S16 334 aa13.84□□□□□ -0.19
USP39-211ENST00000465282 NAA50Q9GZZ1 169 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms