RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RCC2Q9P258 522 aaKnown RBP14.4□□□□□ -0.1
CPSF4-209ENST00000465132 A0A1W2PQ09 198 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 APOA1P02647 267 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 AMY2BP19961 511 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 FPR2P25090 351 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 ZFP36P26651 326 aaKnown RBP14.39□□□□□ -0.11
CPSF4-209ENST00000465132 VEGFCP49767 419 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 P2RX3P56373 397 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 EDDM3BP56851 147 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 RPL31P62899 125 aaKnown RBP14.39□□□□□ -0.11
CPSF4-209ENST00000465132 KRBOX4Q5JUW0 171 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 NKAPLQ5M9Q1 402 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 C8orf46Q8TAG6 207 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 DCTN5Q9BTE1 182 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 PPA2Q9H2U2 334 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 COMMD3Q9UBI1 195 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 RABL2AQ9UBK7 228 aaPredicted RBP14.39□□□□□ -0.11
CPSF4-209ENST00000465132 MGAT4AQ9UM21 535 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 RABL2BQ9UNT1 228 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 A3GALT2U3KPV4 340 aa14.39□□□□□ -0.11
CPSF4-209ENST00000465132 A0A075B6Q4 140 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 TRGV10A0A0A0MS01 117 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 TRAV24A0A0B4J272 114 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 TMEM82A0PJX8 343 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 TMEM30CPA0ZSE6 113 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 SERPINE3A8MV23 424 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 PSPNO60542 156 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 PAHP00439 452 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 PPIAL4GP0DN37 164 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 CHATP28329 748 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 RBMXP38159 391 aaKnown RBP14.38□□□□□ -0.11
CPSF4-209ENST00000465132 OR3A1P47881 315 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 PITPNAQ00169 270 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 TUSC1Q2TAM9 212 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 SLC35E4Q6ICL7 350 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 TRAT1Q6PIZ9 186 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 OR4S1Q8NGB4 309 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 CHST6Q9GZX3 395 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 GAL3ST2Q9H3Q3 398 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 ETAA1Q9NY74 926 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 RPUSD1Q9UJJ7 312 aaKnown RBP14.38□□□□□ -0.11
CPSF4-209ENST00000465132 WNK2Q9Y3S1 2297 aa14.38□□□□□ -0.11
CPSF4-209ENST00000465132 A0A0B4J203 849 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 IGHV2-70DA0A0C4DH43 119 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 KIR2DS1A0A191URI9 304 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 RGS5O15539 181 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 TPPPO94811 219 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 S100A5P33763 92 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 EDDM3AQ14507 147 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 KIR3DL3Q8N743 410 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 MCFD2Q8NI22 146 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 NICN1Q9BSH3 213 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 MMP27Q9H306 513 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 MMP26Q9NRE1 261 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 UBE2J1Q9Y385 318 aaPredicted RBP14.37□□□□□ -0.11
CPSF4-209ENST00000465132 LINC00312Q9Y6C7 94 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 MGAM2Q2M2H8 2515 aa14.37□□□□□ -0.11
CPSF4-209ENST00000465132 A6NHS1 94 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 GSTP1P09211 210 aaKnown RBP14.36□□□□□ -0.11
CPSF4-209ENST00000465132 HKR1P10072 659 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 GZMHP20718 246 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 MNDAP41218 407 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 SEC61A1P61619 476 aaKnown RBP14.36□□□□□ -0.11
CPSF4-209ENST00000465132 ATXN7L3Q14CW9 347 aaPredicted RBP14.36□□□□□ -0.11
CPSF4-209ENST00000465132 PDCD1Q15116 288 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 PNLIPRP3Q17RR3 467 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 METTL11BQ5VVY1 283 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 BAIAP2L2Q6UXY1 529 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 RBMS3Q6XE24 437 aaKnown RBP14.36□□□□□ -0.11
CPSF4-209ENST00000465132 C1orf122Q6ZSJ8 110 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 MOB1BQ7L9L4 216 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 TRAPPC6BQ86SZ2 158 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 ZNF554Q86TJ5 538 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 FAM185AQ8N0U4 392 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 SIGLECL1Q8N7X8 197 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 ZNF747Q9BV97 191 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 KCNK15Q9H427 330 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 KCNIP1Q9NZI2 227 aa14.36□□□□□ -0.11
CPSF4-209ENST00000465132 ARHGAP32A7KAX9 2087 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 MEIKINA0A087WXM9 373 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 ODAMA1E959 279 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 FAM25AB3EWG3 89 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 FAM25CB3EWG5 89 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 FAM25GB3EWG6 89 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 HSPB6O14558 160 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 SOCS1O15524 211 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 CLPXO76031 633 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 RBP4P02753 201 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 CD3GP09693 182 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 EFNB2P52799 333 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 AESQ08117 197 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 FOXL1Q12952 345 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 PRR31Q5SQ13 230 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 C6orf183Q5T699 404 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 LY6G5BQ8NDX9 201 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 OR5H6Q8NGV6 325 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 DCUN1D5Q9BTE7 237 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 PECRQ9BY49 303 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 C6orf62Q9GZU0 229 aaPredicted RBP14.35□□□□□ -0.11
CPSF4-209ENST00000465132 CHMP1AQ9HD42 196 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms