RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 OLIG3Q7RTU3 272 aa1.61□□□□□ -2.15
PTPN12-210ENST00000464313 ST13P4Q8IZP2 240 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-210ENST00000464313 CASTOR1Q8WTX7 329 aa1.61□□□□□ -2.15
PTPN12-210ENST00000464313 CATSPER2Q96P56 530 aa1.61□□□□□ -2.15
PTPN12-210ENST00000464313 TAPBPLQ9BX59 468 aa1.61□□□□□ -2.15
PTPN12-210ENST00000464313 ARL6Q9H0F7 186 aa1.61□□□□□ -2.15
PTPN12-210ENST00000464313 PHLDA3Q9Y5J5 127 aa1.61□□□□□ -2.15
PTPN12-210ENST00000464313 ARGFXA6NJG6 315 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 I3L4J1 428 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 PSMD11O00231 422 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 EEF1E1O43324 174 aaKnown RBP1.6□□□□□ -2.15
PTPN12-210ENST00000464313 SPNP16150 400 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 PYCR1P32322 319 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 RHOAP61586 193 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 ZCWPW2Q504Y3 356 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 AHSA2Q719I0 299 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 TCF24Q7RTU0 167 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 TCF23Q7RTU1 214 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 SLC25A45Q8N413 288 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 KRTCAP2Q8N6L1 136 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 FER1L6-AS1Q8NA97 138 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 KCTD4Q8WVF5 259 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 ZNF75CPQ92670 426 aaPredicted RBP1.6□□□□□ -2.15
PTPN12-210ENST00000464313 PGLYRP3Q96LB9 341 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 SIKE1Q9BRV8 207 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 POTEKPQ9BYX7 375 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 RPUSD1Q9UJJ7 312 aaKnown RBP1.6□□□□□ -2.15
PTPN12-210ENST00000464313 ZNF337Q9Y3M9 751 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 LINC00588Q9Y4M8 146 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 ITGB4P16144 1822 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 KMT2EQ8IZD2 1858 aa1.6□□□□□ -2.15
PTPN12-210ENST00000464313 TRAV8-2A0A0B4J237 113 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 A0A1W2PRG6 482 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 UBDO15205 165 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 GYPCP04921 128 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 GZMHP20718 246 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 CSRP1P21291 193 aaKnown RBP1.59□□□□□ -2.15
PTPN12-210ENST00000464313 RPA3P35244 121 aaPredicted RBP1.59□□□□□ -2.15
PTPN12-210ENST00000464313 CBX5P45973 191 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 RAB2AP61019 212 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 TSPAN5P62079 268 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 PSG4Q00888 419 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 CD164Q04900 197 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 MMDQ15546 238 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 LAMTOR1Q6IAA8 161 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 ZNF567Q8N184 647 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 HIST1H2BAQ96A08 127 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 MRM2Q9UI43 246 aaKnown RBP1.59□□□□□ -2.15
PTPN12-210ENST00000464313 SAMHD1Q9Y3Z3 626 aaKnown RBP1.59□□□□□ -2.15
PTPN12-210ENST00000464313 USH1CQ9Y6N9 552 aa1.59□□□□□ -2.15
PTPN12-210ENST00000464313 SHANK3Q9BYB0 1731 aa1.59□□□□□ -2.16
PTPN12-210ENST00000464313 YLPM1P49750 1951 aaKnown RBP1.58□□□□□ -2.16
PTPN12-210ENST00000464313 FAM183AA6NL82 134 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 C17orf51A8MQB3 221 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 C8orf87E5RJ46 101 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 RNASEK-C17orf49H0YIS7 233 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 KLRC4-KLRK1H3BQV0 150 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 PLPP3O14495 311 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 FGF16O43320 207 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 PSKH1P11801 424 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 PYCR3Q53H96 274 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 HES3Q5TGS1 186 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 FAM183BPQ6ZVS7 135 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 SSX7Q7RTT5 188 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 NIT1Q86X76 327 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 TRIML2Q8N7C3 387 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 OR5C1Q8NGR4 320 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 OR2Y1Q8NGV0 311 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 CLDN23Q96B33 292 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 MSANTD3Q96H12 275 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 PRSS27Q9BQR3 290 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 FAAP24Q9BTP7 215 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 ALX4Q9H161 411 aaPredicted RBP1.58□□□□□ -2.16
PTPN12-210ENST00000464313 GOLPH3Q9H4A6 298 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 HAUS4Q9H6D7 363 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 AGPAT3Q9NRZ7 376 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 MAT2BQ9NZL9 334 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 ENPP5Q9UJA9 477 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 POFUT2Q9Y2G5 429 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 SNX24Q9Y343 169 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 LCTP09848 1927 aa1.58□□□□□ -2.16
PTPN12-210ENST00000464313 C17orf98A8MV24 154 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 TMEM250H0YL14 139 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 POLR3GO15318 223 aaPredicted RBP1.57□□□□□ -2.16
PTPN12-210ENST00000464313 CST4P01036 141 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 S100A9P06702 114 aaKnown RBP1.57□□□□□ -2.16
PTPN12-210ENST00000464313 PSMB9P28065 219 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 CRABP1P29762 137 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 MP68P56378 58 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 DYNLL1P63167 89 aaKnown RBP1.57□□□□□ -2.16
PTPN12-210ENST00000464313 APOFQ13790 326 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 BSXQ3C1V8 233 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 ZNF322Q6U7Q0 402 aaPredicted RBP1.57□□□□□ -2.16
PTPN12-210ENST00000464313 SPNS3Q6ZMD2 512 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 Q6ZRU5 148 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 OR2V1Q8NHB1 315 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 PDCD6IPQ8WUM4 868 aaKnown RBP1.57□□□□□ -2.16
PTPN12-210ENST00000464313 IFT81Q8WYA0 676 aa1.57□□□□□ -2.16
PTPN12-210ENST00000464313 KLF6Q99612 283 aaPredicted RBP1.57□□□□□ -2.16
PTPN12-210ENST00000464313 EBPLQ9BY08 206 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms