RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 GTF3AQ92664 365 aaKnown RBP8.44□□□□□ -1.06
PTPRD-207ENST00000463477 MOB3AQ96BX8 217 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 C12orf49Q9H741 205 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 ZFP57Q9NU63 452 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 RCC2Q9P258 522 aaKnown RBP8.44□□□□□ -1.06
PTPRD-207ENST00000463477 LRBAP50851 2863 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 POLQO75417 2590 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 ZNF850A8MQ14 1090 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 CNOT4O95628 575 aaKnown RBP8.43□□□□□ -1.06
PTPRD-207ENST00000463477 KNG1P01042 644 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 IFNA21P01568 189 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 CD79AP11912 226 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 FGF12P61328 243 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 RAB32Q13637 225 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 TMEM187Q14656 261 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 CEACAM21Q3KPI0 293 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 PIGYQ3MUY2 71 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 BEX5Q5H9J7 111 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 EIF5AL1Q6IS14 154 aaKnown RBP8.43□□□□□ -1.06
PTPRD-207ENST00000463477 CALHM1Q8IU99 346 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 ZDHHC23Q8IYP9 409 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 SLC38A6Q8IZM9 456 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 FAM185AQ8N0U4 392 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 OR56B2PQ8NGI1 322 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 OR5A2Q8NGI9 324 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 RNF141Q8WVD5 230 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 POM121L2Q96KW2 1035 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 WFIKKN1Q96NZ8 548 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 SYT3Q9BQG1 590 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 RSRP1Q9BUV0 290 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 SLC5A7Q9GZV3 580 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 LIME1Q9H400 295 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 NAA60Q9H7X0 242 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 OR5AC2Q9NZP5 309 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 STARD10Q9Y365 291 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 A6NNC1 897 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 MPTX1A8MV57 137 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 GAPDHP04406 335 aaKnown RBP8.43□□□□□ -1.06
PTPRD-207ENST00000463477 GLAP06280 429 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 GLP1RP43220 463 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 PIGPP57054 158 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 PLP2Q04941 152 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 PRDX4Q13162 271 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 P2RY6Q15077 328 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 FAM74A1Q5RGS3 127 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 Q6ZT83 130 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 SLC25A26Q70HW3 274 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 MRPL21Q7Z2W9 205 aaKnown RBP8.43□□□□□ -1.06
PTPRD-207ENST00000463477 MKXQ8IYA7 352 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 CCDC71LQ8N9Z2 235 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 MARC2Q969Z3 335 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 SAT2Q96F10 170 aaPredicted RBP8.43□□□□□ -1.06
PTPRD-207ENST00000463477 USB1Q9BQ65 265 aaKnown RBP8.43□□□□□ -1.06
PTPRD-207ENST00000463477 C1QTNF6Q9BXI9 259 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 PLK3Q9H4B4 646 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 PLEKHA2Q9HB19 425 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 RHOFQ9HBH0 211 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 TMA7Q9Y2S6 64 aaKnown RBP8.43□□□□□ -1.06
PTPRD-207ENST00000463477 MPC1Q9Y5U8 109 aa8.43□□□□□ -1.06
PTPRD-207ENST00000463477 MSGN1A6NI15 193 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 H7C1Q1 480 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 DEDDO75618 318 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 SCO1O75880 301 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 NAPSAO96009 420 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 PLATP00750 562 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 IGHV3-9P01782 118 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 HOXB5P09067 269 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 CCKARP32238 428 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 KRTAP10-9P60411 292 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 RND3P61587 244 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 RAB1AP62820 205 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 SRPXP78539 464 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 TAGLNQ01995 201 aaKnown RBP8.42□□□□□ -1.06
PTPRD-207ENST00000463477 SMCO1Q147U7 214 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 IAH1Q2TAA2 248 aaPredicted RBP8.42□□□□□ -1.06
PTPRD-207ENST00000463477 ABCA11PQ4W5N1 156 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 GGNBP1Q5YKI7 109 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 SLC22A25Q6T423 547 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 LIAT1Q6ZQX7 453 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 C22orf34Q6ZV56 151 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 HPSE2Q8WWQ2 592 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 NANOS1Q8WY41 292 aaKnown RBP8.42□□□□□ -1.06
PTPRD-207ENST00000463477 LURAP1Q96LR2 239 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 PAPOLGQ9BWT3 736 aaKnown RBP8.42□□□□□ -1.06
PTPRD-207ENST00000463477 RIMS4Q9H426 269 aaPredicted RBP8.42□□□□□ -1.06
PTPRD-207ENST00000463477 TAS2R3Q9NYW6 316 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 SPEF1Q9Y4P9 236 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 CSMD2Q7Z408 3487 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 AKAP6Q13023 2319 aa8.42□□□□□ -1.06
PTPRD-207ENST00000463477 TRBV6-6A0A0A6YYG2 114 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 C5orf49A4QMS7 147 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 OR5B21A6NL26 309 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 HLA-HP01893 362 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 FAM157CP0CG43 387 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 HKR1P10072 659 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 FCGR2CP31995 323 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 IL13RA2Q14627 380 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 FBXW9Q5XUX1 488 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 UNQ6126/PRO20091Q6UXV3 157 aa8.41□□□□□ -1.06
PTPRD-207ENST00000463477 IL34Q6ZMJ4 242 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms