RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 KIF25Q9UIL4 384 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 NUP50Q9UKX7 468 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 HSF4Q9ULV5 492 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 FAM96BQ9Y3D0 163 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 A0A0A6YYH2 397 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SHISA3A0PJX4 238 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 UBE2QL1A1L167 161 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 BTBD17A6NE02 478 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 A6NJ64 397 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 POM121CA8CG34 1229 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SERPINE3A8MV23 424 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 TOR1AO14656 332 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SPINT2O43291 252 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SLC2A2P11168 524 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-206ENST00000462613 CCL3L1P16619 93 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 EPHA1P21709 976 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 CHATP28329 748 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 TALDO1P37837 337 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 MNDAP41218 407 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 NCS1P62166 190 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 PITPNAQ00169 270 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 DYNC1I2Q13409 638 aaKnown RBP5.25□□□□□ -1.57
SF3B1-206ENST00000462613 UNC119Q13432 240 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF273Q14593 569 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 RSBN1Q5VWQ0 802 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-206ENST00000462613 TMEM200BQ69YZ2 307 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 HEPN1Q6WQI6 88 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 IL17RELQ6ZVW7 336 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 MOB1BQ7L9L4 216 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF554Q86TJ5 538 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 FAM89BQ8N5H3 189 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 OR10A7Q8NGE5 316 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 OR10R2Q8NGX6 335 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SETD6Q8TBK2 473 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF596Q8TC21 504 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 CORO2AQ92828 525 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 ZDHHC16Q969W1 377 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SLC25A46Q96AG3 418 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 DACT3Q96B18 629 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-206ENST00000462613 CREB3L1Q96BA8 519 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 S100A16Q96FQ6 103 aaKnown RBP5.25□□□□□ -1.57
SF3B1-206ENST00000462613 GFI1Q99684 422 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 CMSS1Q9BQ75 279 aaKnown RBP5.25□□□□□ -1.57
SF3B1-206ENST00000462613 NICN1Q9BSH3 213 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SUCNR1Q9BXA5 334 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SIRPDQ9H106 197 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 LPAR5Q9H1C0 372 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 RNF167Q9H6Y7 350 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 UNKLQ9H9P5 680 aaKnown RBP5.25□□□□□ -1.57
SF3B1-206ENST00000462613 C12orf4Q9NQ89 552 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SIRT7Q9NRC8 400 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 RHBDL2Q9NX52 303 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 NDUFA13Q9P0J0 144 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 ADAM30Q9UKF2 790 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SPATA2Q9UM82 520 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 SESN1Q9Y6P5 492 aa5.25□□□□□ -1.57
SF3B1-206ENST00000462613 TEP1Q99973 2627 aaKnown RBP5.25□□□□□ -1.57
SF3B1-206ENST00000462613 NSD1Q96L73 2696 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-206ENST00000462613 A0A075B6Q4 140 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 A0A0A6YYJ9 748 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 IGHV1-69DA0A0B4J2H0 117 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 KBTBD11-OT1A0A1B0GTJ5 212 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 C17orf98A8MV24 154 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 LDLRAD4O15165 306 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 ORC5O43913 435 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 FCN3O75636 299 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 RGS11O94810 467 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 IGHV1-69P01742 117 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 LPLP06858 475 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 GSTP1P09211 210 aaKnown RBP5.24□□□□□ -1.57
SF3B1-206ENST00000462613 FBP1P09467 338 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 CLEC2LP0C7M8 214 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 IGHV1-8P0DP01 117 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 SNRPBP14678 240 aaKnown RBP5.24□□□□□ -1.57
SF3B1-206ENST00000462613 MMP9P14780 707 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF182P17025 639 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-206ENST00000462613 CDK2P24941 298 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 NFYBP25208 207 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 RPS19P39019 145 aaKnown RBP5.24□□□□□ -1.57
SF3B1-206ENST00000462613 CEACAM3P40198 252 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 UBE2E1P51965 193 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 PRRX1P54821 245 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 RIPPLY3P57055 190 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 GNG2P59768 71 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 QRFPP83859 136 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 CTF1Q16619 201 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 UBE2NLQ5JXB2 153 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 BRICD5Q6PL45 260 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF782Q6ZMW2 699 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF497Q6ZNH5 498 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 SLC16A12Q6ZSM3 486 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 C6orf201Q7Z4U5 140 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 RTN4RL2Q86UN3 420 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 NR2C2APQ86WQ0 139 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 PRR18Q8N4B5 295 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 OR4K15Q8NH41 348 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 PLPPR1Q8TBJ4 325 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 MRGPRDQ8TDS7 321 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 CCDC107Q8WV48 283 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 ARL11Q969Q4 196 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms