RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 FUT3P21217 361 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 COX7A1P24310 79 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 GDNFP39905 211 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 UBA52P62987 128 aaKnown RBP16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 BAMBIQ13145 260 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 MIDNQ504T8 468 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 OR2W3Q7Z3T1 314 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 OR11H6Q8NGC7 330 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 OR51D1Q8NGF3 324 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 ZFAND2BQ8WV99 257 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 TMEM158Q8WZ71 300 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 TMEM59Q9BXS4 323 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 GAL3ST2Q9H3Q3 398 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 LINC00574Q9H8X3 128 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 FBLN5Q9UBX5 448 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 SSR3Q9UNL2 185 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 PEX16Q9Y5Y5 336 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 SESN1Q9Y6P5 492 aa16.78■□□□□ 0.28
RPUSD3-210ENST00000460909 A0A0A6YYD4 124 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 ZNF729A6NN14 1252 aaPredicted RBP16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 IFITM5A6NNB3 132 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 CLDN34H7C241 214 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 LDLRAD4O15165 306 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 GLAP06280 429 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 MELTFP08582 738 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 RAB3BP20337 219 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 SLC9A3R2Q15599 337 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 C2orf76Q3KRA6 126 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 HES5Q5TA89 166 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 PRAMEF5Q5TYX0 476 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 BAIAP2L2Q6UXY1 529 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 ZNF497Q6ZNH5 498 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 GAPTQ8N292 157 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 ZNF565Q8N9K5 539 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 OR13D1Q8NGV5 346 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 C17orf50Q8WW18 174 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 FAM3DQ96BQ1 224 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 DUX5Q96PT3 197 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 CHCHD6Q9BRQ6 235 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 NICN1Q9BSH3 213 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 LPAR5Q9H1C0 372 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 STEAP1Q9UHE8 339 aa16.77■□□□□ 0.28
RPUSD3-210ENST00000460909 KBTBD11-OT1A0A1B0GTJ5 212 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 RNF212BA8MTL3 300 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 ODF3BA8MYP8 253 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 MCRIP1C9JLW8 97 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 HOXA3O43365 443 aaPredicted RBP16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 PDCD6O75340 191 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 MT-ND4P03905 459 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 SMIM18P0DKX4 95 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 CDK2P24941 298 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 CHATP28329 748 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 RBM39Q14498 530 aaKnown RBP16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 ZNF626Q68DY1 528 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 LDLRAD3Q86YD5 345 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 FAM89BQ8N5H3 189 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 ZDHHC16Q969W1 377 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 YIPF6Q96EC8 236 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 TMEM133Q9H2Q1 129 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 RNF167Q9H6Y7 350 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 VCX3AQ9NNX9 186 aa16.76■□□□□ 0.27
RPUSD3-210ENST00000460909 TRAV39A0A0B4J263 110 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 TMEM30CPA0ZSE6 113 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 NPIPB11E5RHQ5 1161 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 H3BUI4 141 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 TRIM77I1YAP6 450 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 OMGP23515 440 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 GLP1RP43220 463 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 LDLRAD2Q5SZI1 272 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 TPRA1Q86W33 373 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 MRGPRDQ8TDS7 321 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 NEK7Q8TDX7 302 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 FAM216AQ8WUB2 273 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 DYRK2Q92630 601 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 KCTD7Q96MP8 289 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 CENPOQ9BU64 300 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 CALYQ9NYX4 217 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 ZNRD1Q9P1U0 126 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 FAM96BQ9Y3D0 163 aa16.75■□□□□ 0.27
RPUSD3-210ENST00000460909 A0A087X0M5 115 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 IGHV2-26A0A0B4J1V2 119 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 TMEM272A0A1B0GTI8 110 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 A0A1B0GX30 115 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 FOXI3A8MTJ6 420 aaPredicted RBP16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 AIPO00170 330 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 RNASE1P07998 156 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 FBP1P09467 338 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 PLA2G7Q13093 441 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 UTF1Q5T230 341 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 KIRREL1Q96J84 757 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 C19orf24Q9BVV8 132 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 ZMAT3Q9HA38 289 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 ETAA1Q9NY74 926 aa16.74■□□□□ 0.27
RPUSD3-210ENST00000460909 LOC100506127A0A0U1RQW1 187 aa16.73■□□□□ 0.27
RPUSD3-210ENST00000460909 UBE2QL1A1L167 161 aa16.73■□□□□ 0.27
RPUSD3-210ENST00000460909 SMIM30A4D0T7 59 aa16.73■□□□□ 0.27
RPUSD3-210ENST00000460909 CA11O75493 328 aa16.73■□□□□ 0.27
RPUSD3-210ENST00000460909 IL1AP01583 271 aa16.73■□□□□ 0.27
RPUSD3-210ENST00000460909 CD34P28906 385 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms