RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 TMEM123Q8N131 208 aa5.5□□□□□ -1.53
HLA-DQA1-205ENST00000460633 GCSAMQ8N6F7 178 aa5.5□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TMEM229BQ8NBD8 167 aa5.5□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OR5AP2Q8NGF4 316 aa5.5□□□□□ -1.53
HLA-DQA1-205ENST00000460633 FAM131CQ96AQ9 280 aa5.5□□□□□ -1.53
HLA-DQA1-205ENST00000460633 SCARF2Q96GP6 870 aaPredicted RBP5.5□□□□□ -1.53
HLA-DQA1-205ENST00000460633 UCN2Q96RP3 112 aa5.5□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TMUB1Q9BVT8 246 aa5.5□□□□□ -1.53
HLA-DQA1-205ENST00000460633 KCNK7Q9Y2U2 307 aa5.5□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ALPK3Q96L96 1907 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 A0A096LPE4 126 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TRBV5-3A0A0A0MS03 114 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 A0A1B0GWJ7 208 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 A0A1W2PPZ6 126 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ANKRD20A5PA0PJZ0 165 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 PPP5D1E7EU14 171 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 MT-ND4LP03901 98 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 CXCL2P19875 107 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OVCH2Q7RTZ1 564 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 DCXRQ7Z4W1 244 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TGIF2LYQ8IUE0 185 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TGIF2LXQ8IUE1 241 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 STPG2Q8N412 459 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 C2orf50Q96LR7 162 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 UQCC1Q9NVA1 299 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 RASL12Q9NYN1 266 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 CTSFQ9UBX1 484 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 STRAPQ9Y3F4 350 aaKnown RBP5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 MFSD2BA6NFX1 497 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 B4DSR2 109 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 CORTO00230 105 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 LDLRAD4O15165 306 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TGOLN2O43493 480 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ICOSLGO75144 302 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 GLI4P10075 376 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 GZMHP20718 246 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 B4GALNT1Q00973 533 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 MIDNQ504T8 468 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OR52N4Q8NGI2 321 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OR51M1Q9H341 326 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 PPP1R3EQ9H7J1 279 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 SLC22A13Q9Y226 551 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 FAM74A7A6NL05 159 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 AP4M1O00189 453 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 FFAR1O14842 300 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 HOXA3O43365 443 aaPredicted RBP5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 STAG3L3P0CL85 134 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 MAGEA5P43359 124 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ATP5G2Q06055 141 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 MEF2CQ06413 473 aaPredicted RBP5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 GUK1Q16774 197 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ACOT6Q3I5F7 207 aaPredicted RBP5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 FAM74A3Q4VXF1 159 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 UBE3DQ7Z6J8 389 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OR2G2Q8NGZ5 317 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ISOC2Q96AB3 205 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 C4orf45Q96LM5 186 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ING1Q9UK53 422 aaPredicted RBP5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 CCL27Q9Y4X3 112 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 MMP24Q9Y5R2 645 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TRAV30A0A087WSZ9 112 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TRAV9-2A0A087WT02 112 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 F12P00748 615 aaPredicted RBP5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 IGHV3-9P01782 118 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ADRA2AP08913 450 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 CCL4P13236 92 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 FOXF1Q12946 379 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 DHRS2Q13268 280 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 MOGAT2Q3SYC2 334 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 RNF165Q6ZSG1 346 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 LINC01356Q8N9X3 169 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ASB10Q8WXI3 467 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 G6PC2Q9NQR9 355 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 PIPOXQ9P0Z9 390 aa5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 COA3Q9Y2R0 106 aaPredicted RBP5.49□□□□□ -1.53
HLA-DQA1-205ENST00000460633 LOC107986453A0A1B0GWG9 222 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 LYZL6O75951 148 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 CST2P09228 141 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 VSIG10L2P0DP72 767 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ZNF85Q03923 595 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 EGR3Q06889 387 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TMEM215Q68D42 235 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ZNF383Q8NA42 475 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OR2I1PQ8NGU4 316 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TMEM45BQ96B21 275 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 PHYHIPLQ96FC7 376 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 METTL26Q96S19 204 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 RABAC1Q9UI14 185 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TINAGQ9UJW2 476 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 GDF2Q9UK05 429 aaPredicted RBP5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 SHROOM3Q8TF72 1996 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ST8SIA3O43173 380 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ADRA2CP18825 462 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 CEACAM8P31997 349 aaPredicted RBP5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 H3F3AP84243 136 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 KLF9Q13886 244 aaPredicted RBP5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 CD300LDQ6UXZ3 194 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OR11H4Q8NGC9 324 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TVP23CQ96ET8 276 aa5.48□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ARHGDIGQ99819 225 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms