RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 WNK1Q9H4A3 2382 aa1.73□□□□□ -2.13
RFC4-211ENST00000460408 ABCB11O95342 1321 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 PI4KAP42356 2102 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 MYO16Q9Y6X6 1858 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 IGHV2OR16-5A0A0B4J2B6 119 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 IGKV1-6A0A0C4DH72 117 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 CEACAM18A8MTB9 384 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 VGLL3A8MV65 326 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.72□□□□□ -2.13
RFC4-211ENST00000460408 MYL12BO14950 172 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 KDELR3O43731 214 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 OR7C2O60412 319 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 GMDSO60547 372 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 IGKV1-39P01597 117 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 IGKV1D-39P04432 117 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 SLC35G6P0C7Q6 338 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 GNRHRP30968 328 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 PRSS3P35030 304 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 IDH2P48735 452 aaKnown RBP1.72□□□□□ -2.13
RFC4-211ENST00000460408 GDI2P50395 445 aaKnown RBP1.72□□□□□ -2.13
RFC4-211ENST00000460408 ERFP50548 548 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 MED27Q6P2C8 311 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 C16orf87Q6PH81 154 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 ORMDL3Q8N138 153 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 OR2M7Q8NG81 312 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 OR4M2Q8NGB6 313 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 OR51L1Q8NGJ5 315 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 OR5M1Q8NGP8 315 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 OR52N1Q8NH53 320 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 OR1S1Q8NH92 325 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 PPTC7Q8NI37 304 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 SFXN5Q8TD22 340 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 TMEM159Q96B96 161 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 SNF8Q96H20 258 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 GPR82Q96P67 336 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 ALS2CR12Q96Q35 445 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 CHID1Q9BWS9 393 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 FRMD8P1Q9BZ68 369 aaPredicted RBP1.72□□□□□ -2.13
RFC4-211ENST00000460408 C2orf16Q68DN1 1984 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 THADAQ6YHU6 1953 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 CSMD2Q7Z408 3487 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.72□□□□□ -2.135e-32■■■■■ 117.6
RFC4-211ENST00000460408 LOXHD1Q8IVV2 1947 aa1.72□□□□□ -2.13
RFC4-211ENST00000460408 TGP01266 2768 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 CCDC171Q6TFL3 1326 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 PARP14Q460N5 1801 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 ZNF233A6NK53 670 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 GOLGA8JA6NMD2 632 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 TRAPPC6AO75865 159 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 PLEKHA8P1O95397 391 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 ETHE1O95571 254 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 PTTG1O95997 202 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 OTCP00480 354 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 KRT7P08729 469 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 MMP7P09237 267 aaPredicted RBP1.71□□□□□ -2.14
RFC4-211ENST00000460408 GOLGA8HP0CJ92 632 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 SMIM10L2AP0DMW4 78 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 SMIM10L2BP0DMW5 78 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 PAX6P26367 422 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 CD52P31358 61 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 MPV17P39210 176 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 MLF1P58340 268 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 PPP1CAP62136 330 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 LINC00303Q3SY05 128 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 CPTPQ5TA50 214 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 HES3Q5TGS1 186 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 MORN3Q6PF18 240 aaPredicted RBP1.71□□□□□ -2.14
RFC4-211ENST00000460408 TBPL2Q6SJ96 375 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 EPGNQ6UW88 154 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 CASP12Q6UXS9 341 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 SLC7A5P1Q8MH63 180 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 TMEM104Q8NE00 496 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 OR4A15Q8NGL6 344 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 OR6K6Q8NGW6 343 aa1.71□□□□□ -2.14
RFC4-211ENST00000460408 PDCD6IPQ8WUM4 868 aaKnown RBP1.71□□□□□ -2.14
RFC4-211ENST00000460408 STMN4Q9H169 189 aaPredicted RBP1.71□□□□□ -2.14
RFC4-211ENST00000460408 LAMA4Q16363 1823 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 ESPL1Q14674 2120 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 SONP18583 2426 aaKnown RBP1.7□□□□□ -2.14
RFC4-211ENST00000460408 LOC102724200A0A096LPH7 203 aaPredicted RBP1.7□□□□□ -2.14
RFC4-211ENST00000460408 TRAV8-4A0A0B4J246 113 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 TRAV8-6A0A0B4J262 113 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 A0A0J9YYE9 177 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 TMEM72A0PK05 275 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 MYBPHLA2RUH7 354 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 ISPDA4D126 451 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 A8MWL6 223 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 J3QT63 122 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 SCO1O75880 301 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 P01737 135 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 TRBC1P01850 177 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 MBP02144 154 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 MAS1P04201 325 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 COX6B1P14854 86 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 TGFBR1P36897 503 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 MTPNP58546 118 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 PSMC5P62195 406 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 RBX1P62877 108 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 SLC35B1P78383 322 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms