RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 PIFOQ8TCI5 191 aa11.53□□□□□ -0.56
THBS3-204ENST00000460050 WFDC12Q8WWY7 111 aa11.53□□□□□ -0.56
THBS3-204ENST00000460050 PHYHIPQ92561 330 aa11.53□□□□□ -0.56
THBS3-204ENST00000460050 TMEM203Q969S6 136 aa11.53□□□□□ -0.56
THBS3-204ENST00000460050 MRPS24Q96EL2 167 aaKnown RBP11.53□□□□□ -0.56
THBS3-204ENST00000460050 UQCC2Q9BRT2 126 aa11.53□□□□□ -0.56
THBS3-204ENST00000460050 SLITRK2Q9H156 845 aa11.53□□□□□ -0.56
THBS3-204ENST00000460050 ZNF286AQ9HBT8 521 aa11.53□□□□□ -0.56
THBS3-204ENST00000460050 ISYNA1Q9NPH2 558 aa11.53□□□□□ -0.56
THBS3-204ENST00000460050 CALYQ9NYX4 217 aa11.53□□□□□ -0.56
THBS3-204ENST00000460050 TRAV39A0A0B4J263 110 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 UCHL1P09936 223 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 CGB3P0DN86 165 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 CGB7P0DN87 165 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 MGMTP16455 207 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 CPEP16870 476 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 NFYBP25208 207 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 HTR1DP28221 377 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 CD34P28906 385 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 RPS25P62851 125 aaKnown RBP11.52□□□□□ -0.57
THBS3-204ENST00000460050 TBCEQ15813 527 aaPredicted RBP11.52□□□□□ -0.57
THBS3-204ENST00000460050 SLC35E4Q6ICL7 350 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 BRICD5Q6PL45 260 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 LRRTM1Q86UE6 522 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 RTN4RL2Q86UN3 420 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 TMEM104Q8NE00 496 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 OR4P4Q8NGL7 312 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 ZNF596Q8TC21 504 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 MRGPRDQ8TDS7 321 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 NEK7Q8TDX7 302 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 KIRREL1Q96J84 757 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 MGLLQ99685 303 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 SELENOIQ9C0D9 397 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 BANF2Q9H503 90 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 ABCB10Q9NRK6 738 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 RNF114Q9Y508 228 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 HILPDAQ9Y5L2 63 aa11.52□□□□□ -0.57
THBS3-204ENST00000460050 TMEM30CPA0ZSE6 113 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 CRTAPO75718 401 aaPredicted RBP11.51□□□□□ -0.57
THBS3-204ENST00000460050 TSPAN9O75954 239 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 IL1AP01583 271 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 IGLV1-47P01700 117 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 JUNBP17275 347 aaPredicted RBP11.51□□□□□ -0.57
THBS3-204ENST00000460050 SRMP19623 302 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 RAB13P51153 203 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 TRAM1Q15629 374 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 GLT8D1Q68CQ7 371 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 TMEM91Q6ZNR0 172 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 SGMS2Q8NHU3 365 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 Q96M66 194 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 C16orf95Q9H693 158 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 SPACA1Q9HBV2 294 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 RAB18Q9NP72 206 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 IDI2-AS1Q9NZ38 188 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 RCC2Q9P258 522 aaKnown RBP11.51□□□□□ -0.57
THBS3-204ENST00000460050 TCF19Q9Y242 345 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 TRRAPQ9Y4A5 3859 aa11.51□□□□□ -0.57
THBS3-204ENST00000460050 A0A087X0M5 115 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 A0A1B0GX30 115 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 F2RL2O00254 374 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 TOR1AO14656 332 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 CHST1O43916 411 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 PSMA1P25786 263 aaKnown RBP11.5□□□□□ -0.57
THBS3-204ENST00000460050 SSTR5P35346 364 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 SRSF4Q08170 494 aaKnown RBP11.5□□□□□ -0.57
THBS3-204ENST00000460050 LTC4SQ16873 150 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 C1orf100Q5SVJ3 147 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 UTF1Q5T230 341 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 RAB12Q6IQ22 244 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 LIAT1Q6ZQX7 453 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 ZNF367Q7RTV3 350 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 RFESDQ8TAC1 157 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 FAM46BQ96A09 425 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 CST11Q9H112 138 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 Q9H521 79 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 LINC00574Q9H8X3 128 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 GHRLQ9UBU3 117 aa11.5□□□□□ -0.57
THBS3-204ENST00000460050 A6NDX4 124 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A10PA6NDY2 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A18PA6NE21 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A16PA6NEW6 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A20PA6NIJ5 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A7PA6NKC0 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A22PA8MWA6 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A12PA8MX19 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A5PA8MXJ8 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A23PA8MXZ1 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 MCRIP1C9JLW8 97 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 NPIPB11E5RHQ5 1161 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 MPIG6BO95866 241 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A15PP0C7V4 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A13PP0C7W8 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A14PP0C7W9 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 FAM90A24PP0C7X0 464 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 UBBP0CG47 229 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 DYNLT3P51808 116 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 PROK1P58294 105 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 GABARAPL2P60520 117 aa11.49□□□□□ -0.57
THBS3-204ENST00000460050 RBM39Q14498 530 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms