RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TAS2R4Q9NYW5 299 aa8.03□□□□□ -1.12
HDLBP-228ENST00000459788 FOXJ3Q9UPW0 622 aa8.03□□□□□ -1.12
HDLBP-228ENST00000459788 ST3GAL6Q9Y274 331 aa8.03□□□□□ -1.12
HDLBP-228ENST00000459788 PRKDCP78527 4128 aaKnown RBP8.03□□□□□ -1.12
HDLBP-228ENST00000459788 MEIKINA0A087WXM9 373 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 TRBV5-7A0A0A0MS05 114 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 FAM90A9PA6NNJ1 464 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 J3QR06 171 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 KCNAB3O43448 404 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 ORC5O43913 435 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 CA11O75493 328 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 FAM106CPP0CH98 169 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 VSIG10L2P0DP72 767 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 CALCBP10092 127 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 GTF2F2P13984 249 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 MAPK3P27361 379 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-228ENST00000459788 CAPGP40121 348 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 VDAC2P45880 294 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-228ENST00000459788 SOX2P48431 317 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 RAB7AP51149 207 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 ST3GAL4Q11206 333 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 RBM39Q14498 530 aaKnown RBP8.02□□□□□ -1.13
HDLBP-228ENST00000459788 ATXN7L3Q14CW9 347 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-228ENST00000459788 KPRPQ5T749 579 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-228ENST00000459788 OGFRL1Q5TC84 451 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-228ENST00000459788 OR2G6Q5TZ20 316 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 XAF1Q6GPH4 301 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 OR8H3Q8N146 312 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 NKAIN3Q8N8D7 197 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 GGHQ92820 318 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 PGLYRP3Q96LB9 341 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 NKX3-1Q99801 234 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-228ENST00000459788 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 DPCDQ9BVM2 203 aaPredicted RBP8.02□□□□□ -1.13
HDLBP-228ENST00000459788 CALYQ9NYX4 217 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 IDI2-AS1Q9NZ38 188 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 GHRLQ9UBU3 117 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 KIF25Q9UIL4 384 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 SIGLEC9Q9Y336 463 aa8.02□□□□□ -1.13
HDLBP-228ENST00000459788 TMEM30CPA0ZSE6 113 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 MEX3AA1L020 520 aaKnown RBP8.01□□□□□ -1.13
HDLBP-228ENST00000459788 FGF16O43320 207 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 HTR3BO95264 441 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 PAX6P26367 422 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 WNT4P56705 351 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 RPS11P62280 158 aaKnown RBP eCLIP8.01□□□□□ -1.13
HDLBP-228ENST00000459788 MADCAM1Q13477 382 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 DOC2BQ14184 412 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 HABP2Q14520 560 aaPredicted RBP8.01□□□□□ -1.13
HDLBP-228ENST00000459788 RCN1Q15293 331 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 PLA1AQ53H76 456 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 TRAT1Q6PIZ9 186 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 REC114Q7Z4M0 266 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 ZNF554Q86TJ5 538 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 TMEM219Q86XT9 240 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 GAPTQ8N292 157 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 MS4A15Q8N5U1 240 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 LINC00311Q8N616 119 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 SUMF2Q8NBJ7 301 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 OR13A1Q8NGR1 328 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 RPEQ96AT9 228 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 NR1H4Q96RI1 486 aaPredicted RBP8.01□□□□□ -1.13
HDLBP-228ENST00000459788 ZNF184Q99676 751 aaPredicted RBP8.01□□□□□ -1.13
HDLBP-228ENST00000459788 UQCC2Q9BRT2 126 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 FAM192AQ9GZU8 254 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 PPIL3Q9H2H8 161 aaKnown RBP8.01□□□□□ -1.13
HDLBP-228ENST00000459788 DCLRE1BQ9H816 532 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 RCC2Q9P258 522 aaKnown RBP8.01□□□□□ -1.13
HDLBP-228ENST00000459788 PSORS1C1Q9UIG5 152 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 ING4Q9UNL4 249 aa8.01□□□□□ -1.13
HDLBP-228ENST00000459788 SIRT4Q9Y6E7 314 aaPredicted RBP8.01□□□□□ -1.13
HDLBP-228ENST00000459788 CCRL2O00421 344 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 MYL12BO14950 172 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 OR7C1O76099 320 aaPredicted RBP8□□□□□ -1.13
HDLBP-228ENST00000459788 CLIC3O95833 236 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 LALBAP00709 142 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 GDNFP39905 211 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 GLP1RP43220 463 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 RANBP1P43487 201 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 OR3A4PP47883 348 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 BLCAPP62952 87 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 CD83Q01151 205 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 ZNF816Q0VGE8 651 aaPredicted RBP8□□□□□ -1.13
HDLBP-228ENST00000459788 GPR50Q13585 617 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 PIGYQ3MUY2 71 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 ARSJQ5FYB0 599 aaPredicted RBP8□□□□□ -1.13
HDLBP-228ENST00000459788 STEAP3Q658P3 488 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 ZNF497Q6ZNH5 498 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 STX19Q8N4C7 294 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 FAM110DQ8TAY7 271 aaPredicted RBP8□□□□□ -1.13
HDLBP-228ENST00000459788 PLPPR1Q8TBJ4 325 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 TOMM40LQ969M1 308 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 SLC25A33Q9BSK2 321 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 FKBP14Q9NWM8 211 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 CLEC2DQ9UHP7 191 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 ERGIC3Q9Y282 383 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 MOB4Q9Y3A3 225 aa8□□□□□ -1.13
HDLBP-228ENST00000459788 MCRIP1C9JLW8 97 aa7.99□□□□□ -1.13
HDLBP-228ENST00000459788 GEMIN2O14893 280 aaKnown RBP7.99□□□□□ -1.13
HDLBP-228ENST00000459788 TXNL1O43396 289 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms