RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CDX1P47902 265 aaPredicted RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 GLIPR1P48060 266 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 CYB561P49447 251 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 GPM6AP51674 278 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 NDUFA6P56556 154 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 RAB11AP62491 216 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 GNG3P63215 75 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 DLK1P80370 383 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 SERF2P84101 59 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 DEFA6Q01524 100 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 HGFACQ04756 655 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF154Q13106 437 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 CATR1Q13166 79 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 MRPL49Q13405 166 aaKnown RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ICAM4Q14773 271 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 MSMO1Q15800 293 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 RSPO1Q2MKA7 263 aaPredicted RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 HLA-BQ31612 363 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 CEACAM21Q3KPI0 293 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ACSF3Q4G176 576 aaPredicted RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 TMEM41BQ5BJD5 291 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 IGSF11Q5DX21 431 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 DMRTC1Q5HYR2 192 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 FAM209BQ5JX69 171 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF787Q6DD87 383 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 CRIP3Q6Q6R5 217 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 FAM180AQ6UWF9 173 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 CLEC9AQ6UXN8 241 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 HEPN1Q6WQI6 88 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ETV3LQ6ZN32 361 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF818PQ6ZRF7 136 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 YRDCQ86U90 279 aaKnown RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF573Q86YE8 665 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 THNSL2Q86YJ6 484 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 TDHQ8IZJ6 230 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 TMEM217Q8N7C4 229 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZIC4Q8N9L1 334 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 OR10V1Q8NGI7 309 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 OR5A2Q8NGI9 324 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 OR10D3Q8NH80 312 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 SAP25Q8TEE9 199 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 HPSE2Q8WWQ2 592 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 DYRK2Q92630 601 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 LSM10Q969L4 123 aaKnown RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 CLDN23Q96B33 292 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 S100PBPQ96BU1 408 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 BSCL2Q96G97 398 aaPredicted RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 IMMP1LQ96LU5 166 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 IP6K3Q96PC2 410 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 OR5B12Q96R08 314 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZPBPQ9BS86 351 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 PSMG3Q9BT73 122 aaPredicted RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 RTL8AQ9BWD3 113 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 PARD6GQ9BYG4 376 aaPredicted RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 PKIBQ9C010 78 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 STRADBQ9C0K7 418 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 MAGT1Q9H0U3 335 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 CALHM2Q9HA72 323 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 SH2D2AQ9NP31 389 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 GSN-AS1Q9NRJ2 163 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 TMEM242Q9NWH2 141 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 OCIAD1Q9NX40 245 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 PSENENQ9NZ42 101 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 CISD1Q9NZ45 108 aaKnown RBP2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 KCNIP1Q9NZI2 227 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 GNG13Q9P2W3 67 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 MIOXQ9UGB7 285 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 KCNS2Q9ULS6 477 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 WASF3Q9UPY6 502 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 POLDIP2Q9Y2S7 368 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 OR2W1Q9Y3N9 320 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 DMRT1Q9Y5R6 373 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 MPC1Q9Y5U8 109 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 LIPGQ9Y5X9 500 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 HS3ST3B1Q9Y662 390 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 ATP23Q9Y6H3 246 aa2.87□□□□□ -1.95
HMGN1P18-201ENST00000457642 TNRC6BQ9UPQ9 1833 aaKnown RBP2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 IGKV3D-15A0A087WSY6 115 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 TMEM265A0A087WTH1 108 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 TRAV20A0A0B4J274 112 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 CCDC163A0A0D9SF12 145 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 SMCO3A2RU48 225 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 C5orf49A4QMS7 147 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 MAP1LC3B2A6NCE7 125 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF729A6NN14 1252 aaPredicted RBP2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF716A6NP11 495 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 CEBPZOSA8MTT3 80 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 LINC00587B1AMM8 73 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 B4E171 279 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 NPIPB11E5RHQ5 1161 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 C17orf112F2Z3M2 114 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 J3QT63 122 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 J3QW42 95 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 MASP2O00187 686 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 SYNGR2O43760 224 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 NDUFS6O75380 124 aaKnown RBP2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 PGLYRP1O75594 196 aaPredicted RBP2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF205O95201 554 aa2.86□□□□□ -1.95
HMGN1P18-201ENST00000457642 PTBP3O95758 552 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms