RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 FAM90A14PP0C7W9 464 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FAM90A24PP0C7X0 464 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 NHLRC4P0CG21 123 aaPredicted RBP4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TMEM225BP0DP42 221 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SNRPBP14678 240 aaKnown RBP4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SPNP16150 400 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CALB2P22676 271 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CNTFRP26992 372 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HTR1FP30939 366 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PRRX1P54821 245 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SLURP1P55000 103 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CDC42P60953 191 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ISL1P61371 349 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SLC35B1P78383 322 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 NDPQ00604 133 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CFHR3Q02985 330 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DCTN2Q13561 401 aaKnown RBP4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GPR50Q13585 617 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FHL3Q13643 280 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CXorf66Q5JRM2 361 aaPredicted RBP4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 C9orf66Q5T8R8 295 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RSBN1Q5VWQ0 802 aaPredicted RBP4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 C5orf24Q7Z6I8 188 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 AMIGO2Q86SJ2 522 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 AQP12AQ8IXF9 295 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ARHGAP24Q8N264 748 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 Q8N6K4 173 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 Q8NFD4 153 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR10V1Q8NGI7 309 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR51T1Q8NGJ9 327 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CCDC107Q8WV48 283 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 C4orf3Q8WVX3 66 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ARPC1AQ92747 370 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 EME1Q96AY2 570 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SPSB1Q96BD6 273 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ORAI1Q96D31 301 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 HRASLS5Q96KN8 279 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MBOAT4Q96T53 435 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OSBPL10Q9BXB5 764 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PRRG3Q9BZD7 231 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PARP11Q9NR21 331 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TAS2R3Q9NYW6 316 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 IDI2-AS1Q9NZ38 188 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR6C3Q9NZP0 311 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 H2AFY2Q9P0M6 372 aaPredicted RBP4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GLS2Q9UI32 602 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 WSB1Q9Y6I7 421 aa4.67□□□□□ -1.66
HLA-DPA3-207ENST00000454398 A0A1W2PP11 408 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MAGEA13PA6NCF6 341 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR4C45A6NMZ5 311 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OOSP1A8MZH6 123 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 E9PI62 339 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 H3BUI4 141 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 J3QLW9 94 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SDCBPO00560 298 aaPredicted RBP4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GABRPO00591 440 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ATP6V0E1O15342 81 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FGF16O43320 207 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RAMP3O60896 148 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SAP30O75446 220 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CDRT1O95170 752 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SERPINA3P01011 423 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CGB3P0DN86 165 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CGB7P0DN87 165 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 LYL1P12980 280 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ZNF19P17023 458 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 VDAC1P21796 283 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PRKACBP22694 351 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ATP6V1E1P36543 226 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SOX2P48431 317 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 F2RL1P55085 397 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 EFNB1P98172 346 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DEFA5Q01523 94 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 FOXE3Q13461 319 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DOC2BQ14184 412 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GK3PQ14409 553 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 GNMTQ14749 295 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KISS1Q15726 138 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 ECSCRQ19T08 205 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KDM4DQ6B0I6 523 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TEX38Q6PEX7 206 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 UTS2BQ765I0 119 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 SATL1Q86VE3 508 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 IZUMO1Q8IYV9 350 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PRR18Q8N4B5 295 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TMEM104Q8NE00 496 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 DNAAF1Q8NEP3 725 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 OR11H1Q8NG94 326 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CNIH3Q8TBE1 160 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TNFAIP8L1Q8WVP5 186 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 TSEN15Q8WW01 171 aaKnown RBP4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RGP1Q92546 391 aaPredicted RBP4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CORO2AQ92828 525 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 CREB3L1Q96BA8 519 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 RNFT2Q96EX2 444 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PELI1Q96FA3 418 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 C4orf36Q96KX1 117 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 KCTD7Q96MP8 289 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 MNTQ99583 582 aa4.66□□□□□ -1.66
HLA-DPA3-207ENST00000454398 PDCD1LG2Q9BQ51 273 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms