RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SLC25A15Q9Y619 301 aa3.46□□□□□ -1.86
HMGB3P21-201ENST00000452483 FER1L5A0AVI2 2057 aa3.46□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF518AQ6AHZ1 1483 aa3.46□□□□□ -1.86
HMGB3P21-201ENST00000452483 MRC2Q9UBG0 1479 aa3.46□□□□□ -1.86
HMGB3P21-201ENST00000452483 POGZQ7Z3K3 1410 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 KIF1BO60333 1816 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 VWA8A3KMH1 1905 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 hADV38S2A0JD32 116 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 CIB4A0PJX0 185 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 C5orf49A4QMS7 147 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 TRAPPC13A5PLN9 417 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR5H1A6NKK0 313 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 DEGS1O15121 323 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 EDIL3O43854 480 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 GCM2O75603 506 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZFAND5O76080 213 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 CDRT1O95170 752 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 GADD45GO95257 159 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 EPPINO95925 133 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 CCNE2O96020 404 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 C1QCP02747 245 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 GPX2P18283 190 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 KLK2P20151 261 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 P2RX1P51575 399 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 NCBP2P52298 156 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 SLC18A1P54219 525 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 EMP1P54849 157 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 PIGPP57054 158 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 DAD1P61803 113 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 ELF3P78545 371 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 CDK5Q00535 292 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF763Q0D2J5 394 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 EBPQ15125 230 aaKnown RBP3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 C17orf58Q2M2W7 97 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 CENPWQ5EE01 88 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 SLC25A30Q5SVS4 291 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 TSPO2Q5TGU0 170 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 IGFL2Q6UWQ7 119 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 UNQ9370/PRO34162Q6UXP9 181 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 FA2HQ7L5A8 372 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 TCF24Q7RTU0 167 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 NFE4Q86UQ8 179 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 C20orf196Q8IYI0 205 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZCCHC24Q8N2G6 241 aaKnown RBP3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 C11orf72Q8NBR9 251 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 MBD3L1Q8WWY6 194 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 GALNT14Q96FL9 552 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 BMFQ96LC9 184 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 HSPB9Q9BQS6 159 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 GGACTQ9BVM4 153 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 MND1Q9BWT6 205 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 SH3BGRL3Q9H299 93 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 ACER3Q9NUN7 267 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 MED29Q9NX70 200 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 RNF7Q9UBF6 113 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 SIGLEC7Q9Y286 467 aa3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 RBM7Q9Y580 266 aaKnown RBP3.45□□□□□ -1.86
HMGB3P21-201ENST00000452483 WRNQ14191 1432 aaPredicted RBP eCLIP3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 UHRF1BP1Q6BDS2 1440 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 TMEM131Q92545 1883 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 CAMTA1Q9Y6Y1 1673 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 COL3A1P02461 1466 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 GRIN2BQ13224 1484 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 IGHV1OR15-1A0A075B7D0 117 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 TRAV9-2A0A087WT02 112 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 SMIM26A0A096LP01 95 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 PGPA6NDG6 321 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF850A8MQ14 1090 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 FAM220BPB1ANY3 271 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 H7C1C5 153 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 K7EPK0 472 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 MMP23AO75900 390 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 IFNGP01579 166 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 HTR1AP08908 422 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 CD70P32970 193 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 C1QTNF8P60827 252 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 LCN6P62502 163 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 HLA-DRB3P79483 266 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 CYCSP99999 105 aaKnown RBP3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 HERPUD1Q15011 391 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 JOSD1Q15040 202 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF146Q15072 292 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 PAFAH1B3Q15102 231 aaKnown RBP3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 TMEM236Q5W0B7 351 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZFAND6Q6FIF0 208 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 SLC35E4Q6ICL7 350 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 NOTCH2NLQ7Z3S9 236 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 TMEM179BQ7Z7N9 219 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 LRRC28Q86X40 367 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 C17orf82Q86X59 251 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 SLC22A18ASQ8N1D0 253 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 UMODL1-AS1Q8N2C9 162 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 NUP37Q8NFH4 326 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR11H6Q8NGC7 330 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR2T4Q8NH00 348 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR4K15Q8NH41 348 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 CCL17Q92583 94 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 ROPN1LQ96C74 230 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 TM4SF18Q96CE8 201 aa3.44□□□□□ -1.86
HMGB3P21-201ENST00000452483 RNF185Q96GF1 192 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms