RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ZNF83P51522 516 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 TMPRSS3P57727 454 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 ZNF154Q13106 437 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 GFRALQ6UXV0 394 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 FOXRED2Q8IWF2 684 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 GLYATL2Q8WU03 294 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 AQP10Q96PS8 301 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 REG4Q9BYZ8 158 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 ASF1BQ9NVP2 202 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
AP000253.1-201ENST00000449339 PCNX1Q96RV3 2341 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 MFSD2BA6NFX1 497 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 DEGS1O15121 323 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 GLAP06280 429 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 GNRHRP30968 328 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 LIAT1Q6ZQX7 453 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 CCDC28AQ8IWP9 274 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 Q8IYB0 196 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 LRTM2Q8N967 370 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 MSI2Q96DH6 328 aaKnown RBP13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 SFXN3Q9BWM7 321 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 PFDN2Q9UHV9 154 aa13.65□□□□□ -0.22
AP000253.1-201ENST00000449339 IGKV1-6A0A0C4DH72 117 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 PHF1O43189 567 aaPredicted RBP13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 CTXN2P0C2S0 81 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 M6PRP20645 277 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 FABP6P51161 128 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 ERVK11-1P61568 191 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 EIF2S3LQ2VIR3 472 aaKnown RBP13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 LYZL2Q7Z4W2 148 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 CNTNAP3BQ96NU0 1288 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 CNTNAP3Q9BZ76 1288 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 OBP2BQ9NPH6 170 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 AMDHD2Q9Y303 409 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 TRBV6-6A0A0A6YYG2 114 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 PRRG2O14669 202 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 RCC1P18754 421 aaPredicted RBP13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 FAM27E3Q08E93 113 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 SNTB1Q13884 538 aaKnown RBP13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 OR8G1Q15617 311 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 PAN3Q58A45 887 aaKnown RBP13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 Q6P435 159 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 STOML3Q8TAV4 291 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 SECTM1Q8WVN6 248 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 NRIP2Q9BQI9 281 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 DNAJB11Q9UBS4 358 aa13.64□□□□□ -0.23
AP000253.1-201ENST00000449339 ZZEF1O43149 2961 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 A0A0G2JNJ9 132 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 TEX46H3BTG2 121 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 M0R1B8 84 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 MPPED1O15442 326 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 PGA5P0DJD9 388 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 KCNJ3P48549 501 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 C22orf34Q6ZV56 151 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 FAM185AQ8N0U4 392 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 LGI3Q8N145 548 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 C18orf12Q96KH6 178 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 TP53RKQ96S44 253 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 SHARPINQ9H0F6 387 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 TMEM100Q9NV29 134 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 Q9UFV3 132 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 PURGQ9UJV8 347 aaKnown RBP13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 C3orf85A0A1B0GTC6 90 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 DLL1O00548 723 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 MLNRO43193 412 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 TUSC2O75896 110 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 GRPP07492 148 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 TPT1P13693 172 aaKnown RBP13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 SPIN3Q5JUX0 258 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 ZNF565Q8N9K5 539 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 OR8G5Q8NG78 346 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 CYTL1Q9NRR1 136 aa13.63□□□□□ -0.23
AP000253.1-201ENST00000449339 CHD8Q9HCK8 2581 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 TMEM210A6NLX4 147 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 DEDDO75618 318 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 NXPH2O95156 264 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 OR2H2O95918 312 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 NAAAQ02083 359 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 SMCO1Q147U7 214 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 ZNF880Q6PDB4 577 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 PCSK4Q6UW60 755 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 ZNF818PQ6ZRF7 136 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 LDLRAD3Q86YD5 345 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 LHFPL5Q8TAF8 219 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 IGKV1D-13A0A0B4J2D9 117 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 A8MXE2 369 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 H7C1Q1 480 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 SIRPB1O00241 398 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 SHOXO15266 292 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 TIMM8AO60220 97 aaPredicted RBP13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 SCGB1D2O95969 90 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 HOXD4P09016 255 aaPredicted RBP13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 IGKV1-13P0DP09 117 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 HOXA4Q00056 320 aaPredicted RBP13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 MSMPQ1L6U9 139 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 TIMM23BQ5SRD1 257 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 Q6ZR03 302 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 BAP18Q8IXM2 172 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 OR4A4PQ8NGN8 299 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 BCL2L14Q9BZR8 327 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms